SimpleSearch - Line and FST details


Line specific information

 
Line ID 442E05
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none
Note

Gene hit At3g03605

 
Sequence (A. th genome BLAST matches underlined) 
>442E05-LB-3-6179109-F-150-a
TAACTCCACAAACGATAAATACCCAGATTTAATTTTGAATCAATCAACAATCAAATCTCG
TTTCCTTCTCCTCCGATGATTCACACAACATTTCTATGACCAACCTTTTTCGATGAATCC
AATGGAACTAATTAAACAAGTTTTGTTGCA
GenBank Accession KG785704 [GenBank]
Graphic View Graphic view of gene At3g03605
Predicted Position of Insertion Chr3:6179109 - go to primer design
BLAST e Value 3e-80
Hit Clone Code (BAC ID) MRC8
Hit Gene Code At3g03605 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation long noncoding RNA
Insertion Classification TS2TE
Confirmation Status unknown

Gene hit At2g26160

 
Sequence (A. th genome BLAST matches underlined) 
>37-K024536-022-442-E05-8409
AGCCATTTACATTGAATATATCCTGATACTTGAGGACTTACTTGGGCTGGACTAGAATCC
ATCCCATTCCTATGGGATCCTCCCTATAGTGAGANCCTGTTTACCTGACTCCTTTGGAGC
TAT
GenBank Accession BX943034 [GenBank]
Graphic View Graphic view of gene At2g26160
Predicted Position of Insertion Chr2:11139546 - go to primer design
BLAST e Value 7e-14
Hit Clone Code (BAC ID) T19L18
Hit Gene Code At2g26160 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation F-box SKIP23-like protein (DUF295)
Insertion Classification 5' region
Confirmation Status failed, line belongs to a contamination group, please check line 667A08


Last Updated on 10.06.2021 13:37