SimpleSearch - Line and FST details


Line specific information

 
Line ID 457A11
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At3g50990

 
Sequence (A. th genome BLAST matches underlined) 
>457A11-LB-3-18944776-F-150-a
GACGTTTTGGTATACCATACAATCACCAAACTCATAAATTAATTAGAACAAATAAAAATA
AATTAAACACAATGGCAACAGAAATCAAATTTAACAAAAAAAAAAAAAGATTAACGTTAA
GTCGTTAACCAAACGCTTAGGACTTTTAAC
GenBank Accession KG785986 [GenBank]
Graphic View Graphic view of gene At3g50990
Predicted Position of Insertion Chr3:18944776 - go to primer design
BLAST e Value 3e-80
Hit Clone Code (BAC ID) F24M12
Hit Gene Code At3g50990 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Peroxidase superfamily protein
Insertion Classification TS2TE (3')
Confirmation Status unknown

Gene hit MDK4

 
Sequence (A. th genome BLAST matches underlined) 
>457A11-LB-5-22048551-R-150-a
ATGCAAATATTGCGCAATTAATATAAAATGATCTTGGTGCGGGTAATAATTCTACACACA
CACACCCGTAAGTATTTTCATAAGATCATTTCATAAACACAATATTGAATTTTTTTAAAA
CATGTCTACATTCAATGTTTACTTTTGATT
GenBank Accession KG785987 [GenBank]
Graphic View Graphic view of sequence KG785987 of line 457A11
Predicted Position of Insertion Chr5:22048551 - go to primer design
BLAST e Value 3e-80
Hit Clone Code (BAC ID) MDK4
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37