SimpleSearch - Line and FST details
Line specific information
Line ID | 469C11 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N444963) |
Segregation Analysis | 50:47:46 |
Confirmed for Hit | At1g20700 |
Parent of DUPLO pair | none |
Parent of pair(s) | 11755 |
Gene hit At1g20700
Sequence (A. th genome BLAST matches underlined) | >83-K019027-022-469-C11-8409 TATACTTCATGATCTTGTCTATGGGATCCTCCCTATAGTGAGAGTCAAGGAATACCCCCC GACCCTGGAGACTTTGAGAGTAACAATGTGAAAATTGTGCTTGCGTTTGGAATACAACTA ACGAAATCCAAGGCTTTTTTTTTCCCAGTGTTCGACGCATAACTTAAAATCAAATTTCAT AATGTTTTAAACATTCAAAGACAGTTTACCTACCGCTTAGATATCGATTTATCATTGCTA AAGATATTTGTTAATATAGTTTATGATTTGCTTATATCAAACAATTCAATATATTATTAA TGTTTATTTTCTCTATGGGATCCCCCCTATAG |
GenBank Accession | BX292938 [GenBank] |
Graphic View | ![]() |
Predicted Position of Insertion | Chr1:7182889 - go to primer design |
BLAST e Value | 1e-90 |
Hit Clone Code (BAC ID) | F2D10 |
Hit Gene Code | At1g20700 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | WUSCHEL related homeobox 14 |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Gene hit T8P21
Sequence (A. th genome BLAST matches underlined) | >83-K019031-022-469-C11-8409 TGATCTGTANATTTCCCGGACTGAAGCCATTTACAATTGATATATAAAAAACATATACTT CATGATCTTGCCTATGGGATCCTCCCTATAGTGAGACTCTCTCGCTAAACTCCATTGTTA GCAACCTTGAGTAGCTTAGACGCGCAATTATGATCACTAAACGGTAACTATACTATGAAA TTACGTCCTTGAGGTTGACAGGGTTGCTGTGGCAGTAGAAACACGAAGCTAAGCAAGGAA TCACCATTGCATAATAACATTACATTCGCTCGACAGCTCTTTAATGTCGGCTAAACAAAT AGGACACCTAAAAATATGAATTGCCATTACTTGCGCAATTAATGCTGTCACATGGCTATG TAAAACATTAACGCCTTCAACATCAATATTGTTTTAGATGAGTACTACTATCTTTGTAAA ATTTAGCTAGGGTTTGTAATTTATACCTATTTTGGCAATGTACTAAAATTTGTAGATCAT TTCAGTTACTTATCCTGTAATACAATCCNTCGACACAAAAGATAGATTGTGATAGGATAT GCCCCTTTATGTTTCCTA |
GenBank Accession | FR810729 [GenBank] |
Graphic View | ![]() |
Predicted Position of Insertion | Chr2:15943065 - go to primer design |
BLAST e Value | 2e-73 |
Hit Clone Code (BAC ID) | T8P21 |
Insertion Classification | Genome Hit |
Confirmation Status | unknown |
Last Updated on 10.06.2021 13:37 |