SimpleSearch - Line and FST details
Line specific information
| Line ID | 469C11 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N444963) |
| Segregation Analysis | 50:47:46 |
| Confirmed for Hit | At1g20700 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 11755 |
Gene hit At1g20700
| Sequence (A. th genome BLAST matches underlined) | >83-K019027-022-469-C11-8409 TATACTTCATGATCTTGTCTATGGGATCCTCCCTATAGTGAGAGTCAAGGAATACCCCCC GACCCTGGAGACTTTGAGAGTAACAATGTGAAAATTGTGCTTGCGTTTGGAATACAACTA ACGAAATCCAAGGCTTTTTTTTTCCCAGTGTTCGACGCATAACTTAAAATCAAATTTCAT AATGTTTTAAACATTCAAAGACAGTTTACCTACCGCTTAGATATCGATTTATCATTGCTA AAGATATTTGTTAATATAGTTTATGATTTGCTTATATCAAACAATTCAATATATTATTAA TGTTTATTTTCTCTATGGGATCCCCCCTATAG |
| GenBank Accession | BX292938 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:7182889 - go to primer design |
| BLAST e Value | 1e-90 |
| Hit Clone Code (BAC ID) | F2D10 |
| Hit Gene Code | At1g20700 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | WUSCHEL related homeobox 14 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit T8P21
| Sequence (A. th genome BLAST matches underlined) | >83-K019031-022-469-C11-8409 TGATCTGTANATTTCCCGGACTGAAGCCATTTACAATTGATATATAAAAAACATATACTT CATGATCTTGCCTATGGGATCCTCCCTATAGTGAGACTCTCTCGCTAAACTCCATTGTTA GCAACCTTGAGTAGCTTAGACGCGCAATTATGATCACTAAACGGTAACTATACTATGAAA TTACGTCCTTGAGGTTGACAGGGTTGCTGTGGCAGTAGAAACACGAAGCTAAGCAAGGAA TCACCATTGCATAATAACATTACATTCGCTCGACAGCTCTTTAATGTCGGCTAAACAAAT AGGACACCTAAAAATATGAATTGCCATTACTTGCGCAATTAATGCTGTCACATGGCTATG TAAAACATTAACGCCTTCAACATCAATATTGTTTTAGATGAGTACTACTATCTTTGTAAA ATTTAGCTAGGGTTTGTAATTTATACCTATTTTGGCAATGTACTAAAATTTGTAGATCAT TTCAGTTACTTATCCTGTAATACAATCCNTCGACACAAAAGATAGATTGTGATAGGATAT GCCCCTTTATGTTTCCTA |
| GenBank Accession | FR810729 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:15943065 - go to primer design |
| BLAST e Value | 2e-73 |
| Hit Clone Code (BAC ID) | T8P21 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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