SimpleSearch - Line and FST details


Line specific information

 
Line ID 484G08
Vector Used pAC161
Line Availability available as T3 set from NASC (N446448)
Segregation Analysis 50:32:28
Confirmed for Hit At1g13150
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At1g13150

 
Sequence (A. th genome BLAST matches underlined) 
>484G08-LB-1-4482767-R-150-a
TCTTCCTTGAGCTCGCAGATACGATCCACAATCATCTTGTCGACGAACCCGTGCACGACC
CCAACAGCTATCCTGAGACCTTTTTCATATCCTGTGTCGAGGAACCTCATGGGCTTCCAT
ATAAATGGAGGGATCATGAATCTAAACAGT
GenBank Accession KG786522 [GenBank]
Graphic View Graphic view of gene At1g13150
Predicted Position of Insertion Chr1:4482767 - go to primer design
BLAST e Value 3e-80
Hit Clone Code (BAC ID) F3F19
Hit Gene Code At1g13150 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation cytochrome P450, family 86, subfamily C, polypeptide 4
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit KG786522 [GenBank]

Gene hit At1g04555

 
Sequence (A. th genome BLAST matches underlined) 
>484G08-LB-1-1242859-R-150-a
TCCATCTTCTTCTTCTTCTTCTCGCCGACTCATTTCAGGTCTGTAACTTTTCTGAATTCC
TTGTGGGTATATCCTGATTTTGCGTAATTTCTCTGGATTTCATCGGAATTTGAGCAAAGT
TTGGTGCTTTAGGGATCATCTTCTGATGGG
GenBank Accession KG786521 [GenBank]
Graphic View Graphic view of gene At1g04555
Predicted Position of Insertion Chr1:1242859 - go to primer design
BLAST e Value 3e-80
Hit Clone Code (BAC ID) T1G11
Hit Gene Code At1g04555 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation transmembrane protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37