SimpleSearch - Line and FST details


Line specific information

 
Line ID 540B08
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At5g65920

 
Sequence (A. th genome BLAST matches underlined) 
>58-K020532-022-540-B08-8409
CCATTTACATTGAATTATCCAGATTCTTGGTTAGCAGGTGGGGAAGCATTAATCATGTAT
TTATGATACACTGCTCCATTATTATTCTTAGAGAGTTGAAAGTTTCCTTTTTGACTCGTT
TTTAAAGGCAAGGAAGAAGAAAGACTTTGTTTTTAAAATGCCAATGTTTCAGCCTTCTAA
GAACGGTGGGTTTGATGGGCATATCTTAAATCTACACTCGGCGGTTAAAGACGGTGTTCT
TGGCGGCGGAGATGGGAAATTTCTGGTGGTTGTTACCGATGAGAAGAAGAAATTGGATTT
GAAGGAGATGATTTCTGAGCTGGAATTACCTGAAATACCCTCTGTTTTCATCTGTCCTAT
CTAACTATGGGATCCTCCCTATAGTGAGATAG
GenBank Accession BX547363 [GenBank]
Graphic View Graphic view of gene At5g65920
Predicted Position of Insertion Chr5:26365798 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) K14B20
Hit Gene Code At5g65920 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ARM repeat superfamily protein
Insertion Classification TS2TE (5')
Confirmation Status unknown

Gene hit At1g20050

 
Sequence (A. th genome BLAST matches underlined) 
>58-K020560-022-540-B08-8409
TCCAGATTCTTGCTTAGGACGTGGGGAAGCATTAATCATGAATGTTATGATACACTGCTC
CCTAATCATTCACTATAAAGAAGATATGATACCTTTTGACTCGAACTTCAAGGCGGCGCA
AATGGACTACTGCGCCTTAATCATGCTCTGGTCCCCGCCTTAGGACATGGGTTCTAACCC
CACTTCTAACATTATCTTTTTTTTTGGAAAATTTCGCCACACCAAGGGCAGGAATATATT
CTTGTCCCTTTTCTATATATTATTTAAATTTAAATTATCGGAAAAAAAGAAAAATTAATT
ACCCCTTTTTTTTCCATTCAAAAATGTAGATTCCCCCCCCGATATTAAAAACCCCCCGAA
CCCCCCCAATAGGGAGCCCCCCCAACCCCCCCAAAAGGGGGGCCCCCCAACCCCCCCAAA
GGGGAGGCCCCCNCACCCCCCCCTCGGGGGAGGACCGACGAACACGGAGGGTATT
GenBank Accession BX547364 [GenBank]
Graphic View Graphic view of gene At1g20050
Predicted Position of Insertion Chr1:6949034 - go to primer design
BLAST e Value 3e-16
Hit Clone Code (BAC ID) T20H2
Hit Gene Code At1g20050 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation C-8,7 sterol isomerase
Insertion Classification Promoter
Confirmation Status unknown


Last Updated on 10.06.2021 13:37