SimpleSearch - Line and FST details
Line specific information
Line ID | 547C02 |
Vector Used | pAC161 |
Line Availability | not available |
Segregation Analysis | unknown |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At2g44240
Sequence (A. th genome BLAST matches underlined) | >11-K020631-022-547-C02-8409 GAACCATTTCATTGATCATGATTGAAGAGCTTGTACTGAGTTTATGACAGCATAGATCCA ATAACCCCAAATTTATGAATACTTTAAATTACTAGTTACAAATTTTAAATGAATACCACG AAAACTTAACATACTTTTAAAATTTTTTGATTGAATAACAACCTATGGGATCCTCCCTAT AGTGAGCCACAGAACGTTCCCTGGCAGAACAACCAACTCAAAAAAAAAACGGTTAATTGA TATATCCGGGGGGTATAAGAAATATACACTCCAGATGATGGATGACCCTCTAAGCCCGAT ATACAACGGATTTAAAAAATTTGAACGAATCTCCCAAATAACTC |
GenBank Accession | BX547693 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr2:18289558 - go to primer design |
BLAST e Value | 5e-39 |
Hit Clone Code (BAC ID) | F4I1 |
Hit Gene Code | At2g44240 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | NEP-interacting protein (DUF239) |
Insertion Classification | Promoter |
Confirmation Status | unknown |
Gene hit At5g01650
Sequence (A. th genome BLAST matches underlined) | >11-K020586-022-547-C02-8409 TGTAGGATCGTATATAGCATACATGGTATTTCTCAATGCAACTCCATCAAACCTTAGATA TGTTTACAATACGAAGTAGTTCAAAGTTACTTGATCGATGAGAGTAGATCATACATTTCA AGACAATCACACTAATCACCTACCACGGAATTAAAGAGTCGCCCCGTTCCAACCAAAGAA GGATCCCTGCAAGAAGAACCACACGAGAAAAGAAATGTATAATTGATATATCAGGTGGTT ATAGGCATAAACACTCCAGATGATGGATGACCCTCTAAGCCAGTTAGACAACGGATTTAA AGAAGTTGAACGAATCTCCTAAATAACTCAACAGTGTGGGTGTAAAGATTGAATTCGAGT AGTGGAAACGGTTTATGCATTTGATTTAATTGTTTATAATGGCTATGGGATCCTCCCTAT AGTGAGCTAAGCTAGGGAATCCCCCC |
GenBank Accession | BX547692 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr5:242584 - go to primer design |
BLAST e Value | 0.0 |
Hit Clone Code (BAC ID) | F7A7 |
Hit Gene Code | At5g01650 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | Tautomerase/MIF superfamily protein |
Insertion Classification | TS2TE (3') |
Confirmation Status | unknown |
Last Updated on 10.06.2021 13:37 |