SimpleSearch - Line and FST details


Line specific information

 
Line ID 547C02
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At2g44240

 
Sequence (A. th genome BLAST matches underlined) 
>11-K020631-022-547-C02-8409
GAACCATTTCATTGATCATGATTGAAGAGCTTGTACTGAGTTTATGACAGCATAGATCCA
ATAACCCCAAATTTATGAATACTTTAAATTACTAGTTACAAATTTTAAATGAATACCACG
AAAACTTAACATACTTTTAAAATTTTTTGATTGAATAACAACCTATGGGATCCTCCCTAT
AGTGAGCCACAGAACGTTCCCTGGCAGAACAACCAACTCAAAAAAAAAACGGTTAATTGA
TATATCCGGGGGGTATAAGAAATATACACTCCAGATGATGGATGACCCTCTAAGCCCGAT
ATACAACGGATTTAAAAAATTTGAACGAATCTCCCAAATAACTC
GenBank Accession BX547693 [GenBank]
Graphic View Graphic view of gene At2g44240
Predicted Position of Insertion Chr2:18289558 - go to primer design
BLAST e Value 5e-39
Hit Clone Code (BAC ID) F4I1
Hit Gene Code At2g44240 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation NEP-interacting protein (DUF239)
Insertion Classification Promoter
Confirmation Status unknown

Gene hit At5g01650

 
Sequence (A. th genome BLAST matches underlined) 
>11-K020586-022-547-C02-8409
TGTAGGATCGTATATAGCATACATGGTATTTCTCAATGCAACTCCATCAAACCTTAGATA
TGTTTACAATACGAAGTAGTTCAAAGTTACTTGATCGATGAGAGTAGATCATACATTTCA
AGACAATCACACTAATCACCTACCACGGAATTAAAGAGTCGCCCCGTTCCAACCAAAGAA
GGATCCCTGCAAGAAGAACCACACGAGAAAAGAAATGTATAATTGATATATCAGGTGGTT
ATAGGCATAAACACTCCAGATGATGGATGACCCTCTAAGCCAGTTAGACAACGGATTTAA
AGAAGTTGAACGAATCTCCTAAATAACTCAACAGTGTGGGTGTAAAGATTGAATTCGAGT
AGTGGAAACGGTTTATGCATTTGATTTAATTGTTTATAATGGCTATGGGATCCTCCCTAT
AGTGAGCTAAGCTAGGGAATCCCCCC
GenBank Accession BX547692 [GenBank]
Graphic View Graphic view of gene At5g01650
Predicted Position of Insertion Chr5:242584 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F7A7
Hit Gene Code At5g01650 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Tautomerase/MIF superfamily protein
Insertion Classification TS2TE (3')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37