SimpleSearch - Line and FST details


Line specific information

 
Line ID 567B06
Vector Used pGABI1
Line Availability available as T3 set from NASC (N454354)
Segregation Analysis 50:43:36
Confirmed for Hit At1g19110
Parent of DUPLO pair 561
Parent of pair(s) none

Gene hit At1g19110

 
Sequence (A. th genome BLAST matches underlined) 
>42-K021149-022-567-B06-8409
AAACCGTTCTATACCTTCTACCTAATTTCTGCAATAAGTATGGGATCCTCCCTATAGTGA
GANNNCANTTGGGACATCCGGAAGATACGGAGGAAAGTTCCCCGAGAATGTGATAGCCAA
AGGTCTGCTAGGAGATTTGAGCAGCTTTTCGACAGACTTGACCGTATGGGATCCTCCCTA
TAGTGAGAGCGGGGGGGATTTTCAAATG
GenBank Accession BX652184 [GenBank]
Graphic View Graphic view of gene At1g19110
Predicted Position of Insertion Chr1:6604764 - go to primer design
BLAST e Value 3e-37
Hit Clone Code (BAC ID) F14D16
Hit Gene Code At1g19110 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation inter-alpha-trypsin inhibitor heavy chain-like protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g48610

 
Sequence (A. th genome BLAST matches underlined) 
>42-K021133-022-567-B06-8409
AGCCATTTACATTGAATATATCCTGTAAATACTAAGTATACCCTTCAAATATTCCGGATC
TGACGTCTGCAAGTCCATTGATGATATATGGAAGATACCGAGGATAGTTCCCCGAGAATG
TGATAGCCAAAGGTCTGCTAGGAGATTTGAGCAGCTTTTCGACGGACTTGACTGTATGGG
ATCCTCCCTATAGTGAGATTTTTTTGAAAAANTTAAAAAAAAATCACCCCCACTTTTCCA
TGTTATACTATAATACCAAAAAATTAATATTCTTGATTTATTTTAAAAATCTGTGAATTA
AAAAAAAAAATGAAATGTTGATAATTAAAAATAAAACCAAGGAGTAAGGGGGGACCCATA
TCGGTTGACGCACCTGATTCTGAACCTCTCGGTCGTTCGTTTCTAGTCTTTCCAAGCTCT
ACCCCAGGGTGGTAACTTTCTTCTTCGAGCCGCAAAAACCATCCTTATCTCTCTAATATT
TCTTCCCGGCCAAGTTTCACTTTGAAATT
GenBank Accession BX652183 [GenBank]
Graphic View Graphic view of gene At1g48610
Predicted Position of Insertion Chr1:17973626 - go to primer design
BLAST e Value 2e-81
Hit Clone Code (BAC ID) T1N15
Hit Gene Code At1g48610 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation AT hook motif-containing protein
Insertion Classification Promoter
Confirmation Status unknown


Last Updated on 10.06.2021 13:37