SimpleSearch - Line and FST details
Line specific information
| Line ID | 589B11 |
| Vector Used | pAC161 |
| Line Availability | not available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit F11F19
| Sequence (A. th genome BLAST matches underlined) | >82-K021428-022-589-B11-8409 TAATCTACCGAATAGGGGACAGTGTGTTGGTGTCACGAATACGAAAGATGTATATAATAT GTGTAGCTCAGAAGCTGGAGAATGTGATGTTACTGTTTTGGATCTTTAAGTATATAAGAC GATTAAATATTAAGATTATCGTTTTCAAGGAATGTAGGCCCAATCTTATCTAACTAATCC TTGGGACCATTACTGATTTGTATCTAGTGGCCCAAACAAATATTCTATATTTCACTGATA CGAGTGTTTTGATTCCTTCCATGCAAAACATTTAAAAAACTTGATGTTTATGGTAACTTA AGATTAAGATTTGAAAGAAATCTCAAATATTTTAACCATAATGAAGACAAAAGATGATGA TTATGCGTTATAAAACAAAATGAAATGGGGGCAAAATGTANTCAAATAGAGTTGAACCTG CCACCTTCAGCATTTAATGGGGGCACTTCCTACCATTTTGCTACTTTAATTACATT |
| GenBank Accession | BX655407 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:15139571 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F11F19 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
Gene hit At5g22791
| Sequence (A. th genome BLAST matches underlined) | >82-K021772-022-589-B11-8409 TCGGAATGAGCCTTTACAATTGAAAGCCTCTGTTGATTCATAATTGTGTGATACAGTATA GGGATTTTATGTTTCTAGGGTTATCACTTACAAAGCAGCTATGGAAGATTCACAACTTTC TCCCTCACGTAACCTATGGGATCCTCCCTATAGTGAGACNTATTAATCNCCGGNCTACTC TGATTTTTTTCCCCCCTCTCTTCTCTGCCTTCCTCCCTCTTTTTAAACACCCAAGGGTCC CCGCCATATAGGGAGTCGTTGTCCCCCCCGCTATAGGGAAATGTTAGCTCCTTAGGGAGA GGGGAACTATGCAGAGAGCAGAAGAGTGGCCTCCCCTAAAGAGAGGAGAGCGACTCCTCC AAAGTGAGTCGGGGGCCCCAAAAAGAAAACCAAAAACGAATAGCTCCCCTTGTTGTTCAA TCAAAAACGTCAATCTCCACTATATTA |
| GenBank Accession | BX655409 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr5:7604849 - go to primer design |
| BLAST e Value | 4e-58 |
| Hit Clone Code (BAC ID) | K8E10 |
| Hit Gene Code | At5g22791 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | F-box family protein |
| Insertion Classification | Promoter |
| Confirmation Status | unknown |
Gene hit T6K12
| Sequence (A. th genome BLAST matches underlined) | >82-K021381-022-589-B11-8409 NNTTTCGGCGTGAATCCGGACATGAGCCATTTAAATTGAATATATCCTGATCTACACTGA TAGTTTAAACCGAAGGCGGGAAACGACTATCCTGATCCCCGGGTATGGGATCCTCCCTAT AGTGAGATTGAAATCTATGATTGATTCGATTTTCAGAAGAGCAGTATTGATCTCTTCGAA ACAAAACAAGATGACAAACTACAAACGATCAAAATTAGTGTAAAGGCTCTTTAACATTCA AAGTCTCATCTCATGATAATCTTAGATTACGTAGAGCAAACGTAAGCATTTATTCGTGTA TACCTTCTTAAGGTAATTCATACTTTACATGTATATTTAAAGAGTTGTTGATTTATTTGT CTTTGGTCAATTAGAAAGTCCACTCCAAACTACTCGCTCGATTGCCTGAAGCGTGTTTAT TTCTCAATTAGTAAGTCGCATTGACCTAAATCCACCTGTGCGTCTCCATATTGTTAGGGG AAAAGAAGTGTTTGTGAGTGGCATTGAATCCATTATTTTTCTAATCTCTATAAATGCCAG TTTGTA |
| GenBank Accession | BX655406 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr3:1144828 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | T6K12 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
| Other FSTs Supporting this Hit | BX655406 [GenBank] |
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Last Updated on 10.06.2021 13:37 |
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