SimpleSearch - Line and FST details
Line specific information
| Line ID | 613F06 |
| Vector Used | pAC161 |
| Line Availability | not available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At3g47190
| Sequence (A. th genome BLAST matches underlined) | >46-K021521-022-613-F06-8409 ACTCATACCATATATTTCTAAATTTAATTGACTCACAATAAAAAAAATATGAAAAGAAAT TAGTTGACCTAAAAATGAAAAGAATAATTTATCAAACACTTACATAAACAACAAAATTTA ATTAAACCTAAAATTACAGAACAGTATGGGATCCTCCCTATAGTGAG |
| GenBank Accession | BX656320 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:17376327 - go to primer design |
| BLAST e Value | 7e-29 |
| Hit Clone Code (BAC ID) | F13I12 |
| Hit Gene Code | At3g47190 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| Insertion Classification | Promoter |
| Confirmation Status | unknown |
Gene hit At3g59770
| Sequence (A. th genome BLAST matches underlined) | >46-K021544-022-613-F06-8409 ATGGGATCCTCCCTATAGTGTGTCTCATCTCTCGGCTCTTTCATCGTGTTTCTCTTGAGC TATGGGATCCTCCCTATAGTGAGAGCTTTGGGAACCCGCGAAGATAGAGAACTCGCAGTG ACGTGAACTTCTGCATTTTCTAAGGTGACAAGAGCTTCAGATGTCCTTTTTGAACCAGCT ACGCCATNAAAATTAGAANATTNNCCCACCNNATGANGGAAACCGCCTTGGGATCCCCCC CCAAAGGGGGGGNNNNNNNNNNNNGGNNANAAGAAGTANATTATTCACGTCTAAACTGTT ATATATGAATNGTGATGGTTGTTACGATCTTAGGAATAGAAACGGGCACCGTGGNAGGAG CCNNCTTTNNNNCGAAGGAAATTGAGCGAGTCATAATGATTTGTTATTGTTTATTGTTC |
| GenBank Accession | FR813276 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr3:22085320 - go to primer design |
| BLAST e Value | 3e-04 |
| Hit Clone Code (BAC ID) | F24G16 |
| Hit Gene Code | At3g59770 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | sacI homology domain-containing protein / WW domain-containing protein |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
| Other FSTs Supporting this Hit | FR813276 [GenBank] |
Gene hit At3g44770
| Sequence (A. th genome BLAST matches underlined) | >46-K021520-022-613-F06-8409 CGGNAATNAAGCCATTTACAATTGAAATATAATCCTGNATACCCTTGAATACGCAGATCC ATCGATTATATGTTTTCCCACCGCCAGAGTATGATCATCATCCCGGATATTTGGCCACCT CCCTATTGTGAGATTGTTCTTATCTACGCTTTCACCTCACAATTTTACTAATCCTCGCGA ATTAGAGAGTTTGGTCACTAGAAAGCAAAAGCAAAATACTGATTTTTCAAATTAACTTGT ATGGGATCCTCCCTATAGTGAGA |
| GenBank Accession | BX656319 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr3:16319648 - go to primer design |
| BLAST e Value | 5e-24 |
| Hit Clone Code (BAC ID) | T32N15 |
| Hit Gene Code | At3g44770 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | transmembrane protein, putative (DUF626) |
| Insertion Classification | TS2TE (3') |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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