SimpleSearch - Line and FST details
Line specific information
Line ID | 647G07 |
Vector Used | pAC161 |
Line Availability | not available |
Segregation Analysis | unknown |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At2g27660
Sequence (A. th genome BLAST matches underlined) | >55-K022671-022-647-G07-8409 CTAAAATGTTGAGAGTATGCCATCTGCCATACTTCGAGGATCCGACCCTCCAGTACAAAC CCCTAGAGGACCTCAAACTATAAGGGTACGGAATCCTCCCCATACTGAGAGGGTATGGGA TCCTCCCTATAGTGAG |
GenBank Accession | FR814033 [GenBank] |
Graphic View | ![]() |
Predicted Position of Insertion | Chr2:11799672 - go to primer design |
BLAST e Value | 6e-08 |
Hit Clone Code (BAC ID) | F15K20 |
Hit Gene Code | At2g27660 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | Cysteine/Histidine-rich C1 domain family protein |
Insertion Classification | CDSi |
Confirmation Status | unknown |
Other FSTs Supporting this Hit | BX893568 [GenBank] BX893568 [GenBank] |
Gene hit K8K14
Sequence (A. th genome BLAST matches underlined) | >55-K023295-022-647-G07-8409 GTAACTGCAGCAGAACAACGATGAGATCATATCAATGCGGAAACTCTATGGGATCCTCGC TATAGTGAGACTCAATCCTTCCTTCTTTCATAAGGCAATTCGAGTTTAAAAAATCCCCTG CGGATATATATACTTTTGAAGTTAGAAAAAAACGGGAAACATTCTCTTCCTATCTCCCCA ATGGGGGCGCCAACCCCTTGGGGGACCCCGGCACAATCCCCGCGGCCAGGAAGCCATTAT AACACCGGCTGCCACCTCCCCGAAGAGCAACGCGCCAACCCCA |
GenBank Accession | BX893566 [GenBank] |
Graphic View | ![]() |
Predicted Position of Insertion | Chr5:26903565 - go to primer design |
BLAST e Value | 4e-09 |
Hit Clone Code (BAC ID) | K8K14 |
Insertion Classification | Genome Hit |
Confirmation Status | unknown |
Gene hit At5g13940
Sequence (A. th genome BLAST matches underlined) | >55-K022742-022-647-G07-8409 CGTCATTGATGATCTCTTGTATAGAATATGTACTTGTATATCGTTCACGATTGAACACTT CTTCTTCTTATACGAATCGTCAGATCCTCTGATTACAGCGAACGTCTTCCGTTCCTTCGT TCAATAACCAAATCAGTCCTTCCTTCTCTTCATTAACCTTACCAGTCTTATCTCCGTCCA ATACCAATTTTACACTTTATCAGCTTATAAACTACATTATACTTTAGCAACTTAGAAATT GTCATCATAATTCCGACAGATCGATACTTTCCAAGTCTTAAAGATACATTGCTATTGTTA TGTCGCCATATTCACCTGTCCCTATCTTCCTGTACTGCATTTAATTTC |
GenBank Accession | FR814035 [GenBank] |
Graphic View | ![]() |
Predicted Position of Insertion | Chr5:4495446 - go to primer design |
BLAST e Value | 1e-15 |
Hit Clone Code (BAC ID) | MAC12 |
Hit Gene Code | At5g13940 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | aminopeptidase |
Insertion Classification | CDSi |
Confirmation Status | unknown |
Other FSTs Supporting this Hit | BX893567 [GenBank] BX659724 [GenBank] FR814034 [GenBank] FR814034 [GenBank] |
Last Updated on 10.06.2021 13:37 |