SimpleSearch - Line and FST details


Line specific information

 
Line ID 647G07
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At2g27660

 
Sequence (A. th genome BLAST matches underlined) 
>55-K022671-022-647-G07-8409
CTAAAATGTTGAGAGTATGCCATCTGCCATACTTCGAGGATCCGACCCTCCAGTACAAAC
CCCTAGAGGACCTCAAACTATAAGGGTACGGAATCCTCCCCATACTGAGAGGGTATGGGA
TCCTCCCTATAGTGAG
GenBank Accession FR814033 [GenBank]
Graphic View Graphic view of gene At2g27660
Predicted Position of Insertion Chr2:11799672 - go to primer design
BLAST e Value 6e-08
Hit Clone Code (BAC ID) F15K20
Hit Gene Code At2g27660 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Cysteine/Histidine-rich C1 domain family protein
Insertion Classification CDSi
Confirmation Status unknown
Other FSTs Supporting this Hit BX893568 [GenBank] BX893568 [GenBank]

Gene hit K8K14

 
Sequence (A. th genome BLAST matches underlined) 
>55-K023295-022-647-G07-8409
GTAACTGCAGCAGAACAACGATGAGATCATATCAATGCGGAAACTCTATGGGATCCTCGC
TATAGTGAGACTCAATCCTTCCTTCTTTCATAAGGCAATTCGAGTTTAAAAAATCCCCTG
CGGATATATATACTTTTGAAGTTAGAAAAAAACGGGAAACATTCTCTTCCTATCTCCCCA
ATGGGGGCGCCAACCCCTTGGGGGACCCCGGCACAATCCCCGCGGCCAGGAAGCCATTAT
AACACCGGCTGCCACCTCCCCGAAGAGCAACGCGCCAACCCCA
GenBank Accession BX893566 [GenBank]
Graphic View Graphic view of sequence BX893566 of line 647G07
Predicted Position of Insertion Chr5:26903565 - go to primer design
BLAST e Value 4e-09
Hit Clone Code (BAC ID) K8K14
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At5g13940

 
Sequence (A. th genome BLAST matches underlined) 
>55-K022742-022-647-G07-8409
CGTCATTGATGATCTCTTGTATAGAATATGTACTTGTATATCGTTCACGATTGAACACTT
CTTCTTCTTATACGAATCGTCAGATCCTCTGATTACAGCGAACGTCTTCCGTTCCTTCGT
TCAATAACCAAATCAGTCCTTCCTTCTCTTCATTAACCTTACCAGTCTTATCTCCGTCCA
ATACCAATTTTACACTTTATCAGCTTATAAACTACATTATACTTTAGCAACTTAGAAATT
GTCATCATAATTCCGACAGATCGATACTTTCCAAGTCTTAAAGATACATTGCTATTGTTA
TGTCGCCATATTCACCTGTCCCTATCTTCCTGTACTGCATTTAATTTC
GenBank Accession FR814035 [GenBank]
Graphic View Graphic view of gene At5g13940
Predicted Position of Insertion Chr5:4495446 - go to primer design
BLAST e Value 1e-15
Hit Clone Code (BAC ID) MAC12
Hit Gene Code At5g13940 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation aminopeptidase
Insertion Classification CDSi
Confirmation Status unknown
Other FSTs Supporting this Hit BX893567 [GenBank] BX659724 [GenBank] FR814034 [GenBank] FR814034 [GenBank]


Last Updated on 10.06.2021 13:37