SimpleSearch - Line and FST details


Line specific information

 
Line ID 670E01
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit K19E1

 
Sequence (A. th genome BLAST matches underlined) 
>05-K023074-022-670-E01-8409
ATTCTATCTAATATTGAGGACCTTTATACATATTTTACCGACAAAAGAAAATATATAGCA
TGACTCTACAAAGATATACAAATCTCAATAAGGTAAGACAAATTTCAGAAGGAAGATCTT
GAGCAACAGAAATTTTTCAGATACGAAGTTATGATAAAAGGAGAAAATATAGATAGGGGA
CCACAATACGGCTTCCAAATGAATTGCGCCTAATAATTTACCCACTTGGGGAA
GenBank Accession BX661062 [GenBank]
Graphic View Graphic view of sequence BX661062 of line 670E01
Predicted Position of Insertion Chr5:21612151 - go to primer design
BLAST e Value 1e-107
Hit Clone Code (BAC ID) K19E1
Insertion Classification Genome Hit
Confirmation Status unknown
Other FSTs Supporting this Hit BX661062 [GenBank]

Gene hit K2N11

 
Sequence (A. th genome BLAST matches underlined) 
>05-K022931-022-670-E01-8409
GATCCTCCCTATAGTGAGCTAAAAGTGAAAATGTATTATACTTTTGGTTTTGTGNATTGA
TGGTNATTANTTTAAAAANNAGATGTGGATAAAAATTATGAAATTGAATATATATATATG
ATTAAAAGTTTTGTAATTTTTTTAGAAATAATATTTAAAAATATGGAAAATGAAATTAGA
ATTATTAGTATGGGATGGTGAATAGTGAGGAGTTATAGTGATAATATTTAAAGAGAAAAA
TGGGGGATAATTATTATAATAAAGGAAGAAAGGAAGGGAAATTGGAAAAAAATTTTTTGA
AAAGAGAATGGTTAATGATTAATAATTTAATAAATAGGTAGTAGTAGTTTGAAAGAGGAA
GAAATAATGATGAAGTGTGGATAGAATAAAAGAGGAATGGATGAGAAGGGTAAAATATGA
GAAATAAAGTTATTATTAGATGTAAGTAAAAGAGAAGGTA
GenBank Accession BX661060 [GenBank]
Graphic View Graphic view of sequence BX661060 of line 670E01
Predicted Position of Insertion Chr5:18504667 - go to primer design
BLAST e Value 3e-16
Hit Clone Code (BAC ID) K2N11
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37