SimpleSearch - Line and FST details


Line specific information

 
Line ID 858F11
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit K14B20

 
Sequence (A. th genome BLAST matches underlined) 
>86-K025969-022-858-F11-8409
ATGAAGCCATTTACATTGAATATATCCTCAAGCTACTTCTCCTGACGGTGCGGATTTTGT
TTATGACATTTGACCGGAAAACTACCATGATCTCCGACGTTGAAATCAATCCTTGCCAAT
GAAATCATTGCCTATCAATAGCCATTGATAACATACTCTATAAATTAAAAATACTAAGAA
TTCAAAAATAAACTAGCAATTAATTGTAGAACTAAAACTAGTTGAGTGAATCATACTTTT
GTTAATAACACATAATTAAGATTGAATCCGTGTGATATTTGAAAACTTGGTTGGAATATC
AAAATTCTGCATTTCTGGCAGAGTATGGGATCCTCCCTATAGTGAGANNNNNNNNNNNNN
NNNNCCNNNNNNNNNNCCTAGGGAACCCCCCTAAATTTAGCCTCTATTATTCCTCCCCAA
GGGGGACTCCCCCAACCCCCATTTTAAAATGACCCACCAAACAACCCCCACGGAATCATA
AANATATAATACAACAATAACTCA
GenBank Accession CR402872 [GenBank]
Graphic View Graphic view of sequence CR402872 of line 858F11
Predicted Position of Insertion Chr5:26367509 - go to primer design
BLAST e Value 5e-113
Hit Clone Code (BAC ID) K14B20
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At1g79570

 
Sequence (A. th genome BLAST matches underlined) 
>86-K025968-022-858-F11-8409
CATGAACCATTTACAATTGAATATATCCGGACTGCTCTTCTACCTCAGGTTGGTGAGTTT
GGTTTGTCAAAAATCAAGAGAAATACGTTGGTATCTGGTGGTGTATGGGATCCTCCCTAT
AGAGAGATGTGCACCTTCCCCCCCAGAGGGAGAGCGACCAAGGATTGGAATGATCAACAT
GTGACATTTAAACTACATCCGACGGATGGAGTTGCGA
GenBank Accession CR402871 [GenBank]
Graphic View Graphic view of gene At1g79570
Predicted Position of Insertion Chr1:29933607 - go to primer design
BLAST e Value 3e-31
Hit Clone Code (BAC ID) T8K14
Hit Gene Code At1g79570 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37