SimpleSearch - Line and FST details


Line specific information

 
Line ID 878G10
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At5g42580

 
Sequence (A. th genome BLAST matches underlined) 
>79-K026470-022-878-G10-8409
NNNTTTAGAGGAATTCCGGACATNAGCCATTTACAATTGAAATATCCCGTAAGTTATCCT
CCCAATCATCAGCAGAGCTCTAGTTGTACTCACTGAAATCACAATAAATGTAAAAGTGAA
ACCCGATTACGCATATAATACCCATAATCTAAACCTAAACTACTAACCCAACTTAACCAC
AACTAACCCAAATATATACACTCTACTAGAAGGCGAATGGGATCCTCCCTATACTGAGAG
AGCCGACAAGGTTTTAAATGAATAAAATATACAAAGACAACCCACAAAGGCACAAATGAC
ATTACAAAGTATGGGATCCTCCCTATAGTGAGA
GenBank Accession CR405472 [GenBank]
Graphic View Graphic view of gene At5g42580
Predicted Position of Insertion Chr5:17025645 - go to primer design
BLAST e Value 3e-31
Hit Clone Code (BAC ID) K16E1
Hit Gene Code At5g42580 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation cytochrome P450, family 705, subfamily A, polypeptide 12
Insertion Classification Promoter
Confirmation Status unknown

Gene hit T14G11

 
Sequence (A. th genome BLAST matches underlined) 
>79-K026524-022-878-G10-8409
TAGCCCGAGATGAACTCTTCTTGTAATCATCAAATCTTCATTAAATGTGAAAGTGAAACA
TGATTAAGCTAAAATACAAATAAACTAAACCTCAACTACTAACCAAACTTAACCACAACT
AAACCAAGATATATACACTCTAATAGAATGTGTATGGGATCCTCCCTATACTGAGAAAGC
AGTCGATCCGTGAGATCAGCCGACGCACCGGGCAGGCGCGCAACACGATCGCAAAGTATT
TGAACGCAGGTATGGGATCCTCCCTATAGTGAG
GenBank Accession CR405473 [GenBank]
Graphic View Graphic view of sequence CR405473 of line 878G10
Predicted Position of Insertion Chr2:14417043 - go to primer design
BLAST e Value 5e-42
Hit Clone Code (BAC ID) T14G11
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37