DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_004394
Line Availability available from NASC (N504394) and ABRC (SALK_004394)
Confirmed for Hit At5g49940
Parent of DUPLO pair 2431
Parent of pair(s) none

Gene hit At5g49940

 
Sequence (A. th genome BLAST matches underlined) 
CGCAGAATATTCCCATCGGCCTTATGTAATGCCACGTTACCACCATCAGACATTAAGTAA
GGTCGAATTTCATCCAAAACGCTTTCTACATTTTCCTCAGTTAAAGGTACTTCCAAGATG
GGGTCTGGGGTTGCTACTGCCTTGACAACTGCAAAAATCCAGAAATCAACCATAAAAACC
TAAATACATATCTCTCCAGGAGAAGATACACACAGAAGAAGCAATGATAACGTTTCAAAT
CAATGGAAATGGATATCAAACTTAGGAAAGGAGAACCTTTACTGTAACTTTAGGGAAACG
TTGTAACCATATAATGTCTGATAGAGAGATGGGACCAGAAACCATTCGTTCACAAACTAC
ATATGAAATTATATACCCCTAAAGCAACCCAATAACCGATGATAGCCATATGAAACAAAA
TTTGTCA
GenBank Accession BH757688 [GenBank]
Graphic View Graphic view of gene At5g49940
Predicted Position of Insertion Chr5:20316781 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) K9P8
Hit Gene Code At5g49940 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation NIFU-like protein 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit ED604037 [GenBank]


Last Updated on Thursday, 10 June 2021 13:37