DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_005080c
Line Availability available from NASC (N661340) and ABRC (SALK_005080c)
Confirmed for Hit At3g22820
Parent of DUPLO pair 12361
Parent of pair(s) none

Gene hit At3g22820

 
Sequence (A. th genome BLAST matches underlined) 
TCGCGGCCCATGGACTTCCTCTCCCATAATGTCCAATTACTCGAACCGACAACTTTCGCT
CCTCCACAGTGTCCCGGATTATGGGCGTCGACCTCCCAACTCGCATCTGTAAAGCTTTCG
GTCCCTTCGTACAGATCCTCCACCATCGCCTCACTACTACGACTACTTATAGAACCCAAC
ATCGTGAAACGCTCCCGCGCACGACCACGAATTATCTACATAGCATAGTTTGTTTGTTTT
GAAAAAAAAATCTATATGGAACCGTTTTTTCTGTATAGTTATGTGTGGAATAGGAACCTA
AAAGATCTTAACTTCTAACAATTGCATACTCAACTAAGCAAAATGTTTTGTTGCTTAAAC
AAAAGAAGAAATGAAGGAGAAAAAGTGAAAACCCCATTTTTTGTTTCTTTTGCCTATTTA
CTAGTAGTCATGAATTTAC
GenBank Accession CC051304 [GenBank]
Graphic View Graphic view of gene At3g22820
Predicted Position of Insertion Chr3:8073933 - go to primer design
BLAST e Value 1e-110
Hit Clone Code (BAC ID) MWI23
Hit Gene Code At3g22820 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation allergen-like protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37