DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_016942c
Line Availability available from NASC (N680694) and ABRC (SALK_016942c)
Confirmed for Hit At3g52270
Parent of DUPLO pair 1341
Parent of pair(s) none

Gene hit At3g52270

 
Sequence (A. th genome BLAST matches underlined) 
AGGAATTTCATGATCAAAGTGAGGACCACTTGATATCTCCAAACTCAGAAAACCCATTTC
CCCAAATCCATGGAATTTCAGAGAATGTAAAAGCAAGTTTCTCAAAGGATGAAATTTTCC
CGAATGGTTACTAGAAACCCTAAATAGCTAAACCACGCAATTCCTGAGGAAGATTCAATG
TAACGAGAGATACGCATGCAGAGAGGAGAGAAAATGCGCAGGACGAAAGCATACTTGGGT
CCCTTCGTCCTCGTGAGCCAGAGGATCGACGCCGAGGATGACTTTGGCGTCAGGACGGTA
CGGATCGTCAGGACGGTACGGATCGTCAGGAAAAGAATGAGATTGGAGAGAACTCGCGAC
GAGAGATGGAGCTTTCATCAGCAACATCGATCTCTCTGCCAAACCCGTTTCCAACGCTTC
ATTCTCATTCTTCCTTACCTTCATTTCCACCTTTA
GenBank Accession ED576513 [GenBank]
Graphic View Graphic view of gene At3g52270
Predicted Position of Insertion Chr3:19388423 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T25B15
Hit Gene Code At3g52270 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Transcription initiation factor IIF, beta subunit
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit ED576513 [GenBank]


Last Updated on Thursday, 10 June 2021 13:37