DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_045660c
Line Availability available from NASC (N660407) and ABRC (SALK_045660c)
Confirmed for Hit At1g25240
Parent of DUPLO pair none
Parent of pair(s) 519

Gene hit At1g25240

 
Sequence (A. th genome BLAST matches underlined) 
CTGCGTGGTGATCGAGATCTTCGACATTTATGGAAGAATATGTAGCGCTATCGCCAAGCT
GATGATCTTAAGATTGTAAAGAAGGCTACATCTCAAGGAGAAGATCTCGCACTCTACTTT
GAATTGACCCANNNNNNGCNGGGACNGGNATGACCATCCCAGAAATCCGAGAGATCGAAA
GGGAGGCGACGAATTTCTTGTAGGGACGCGACTTTGCAGCAAAGCTCGCCGTGGACAAGC
ATCAACGGTTTCAAGGCTACAATCCAGCTGCTTGTGCGGTTAGCCCTAGATGACCGAGCC
CGAACCAGCGGCTTGAGATTGGTGGGCGACGACCGGAT
GenBank Accession ED588057 [GenBank]
Graphic View Graphic view of gene At1g25240
Predicted Position of Insertion Chr1:8845596 - go to primer design
BLAST e Value 4e-60
Hit Clone Code (BAC ID) F4F7
Hit Gene Code At1g25240 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ENTH/VHS/GAT family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37