DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_057795c
Line Availability available from NASC (N678533) and ABRC (SALK_057795c)
Confirmed for Hit At4g09420
Parent of DUPLO pair 2533
Parent of pair(s) none

Gene hit At4g09420

 
Sequence (A. th genome BLAST matches underlined) 
AGCGTCAATCAGCGCCGTGTCCTAGTAGTCGACGCGTATATACAACCCACTGATGTTGGC
GAAGCGTCGTTCGACTATGTGTTATTACTAGCAGTTTGAGTCAGTTGCCTCAACGTCAAT
TTCGTTTCTGACTGCACGCACGAGGTCATCGTTGAAGTTCTGTCTACACAATCGGGGACT
AGCCAACTTCTCTGGTGTGAGACCGTCTATTTGATAGGTTCATGGGCCTCAGTCAGAGTC
CTTGTCACCGTTTGAGTGCCCTCTTGAATCTCCTTTGATGTTAAAGATTTTTGTGAATGT
GACTCATCGGTATCTTGCTTATAACTCTTTCCGGCGTTGTCTACGCACTCATGGGCATGG
AAGTTTTTCGAGAGTTCTTCATACACATATCTCGCTAGCGTGGTCTTGCCGACGCCTCCT
TGACAGCAAATACCGATCGAGCGAACTTCCTCGTTAGATTTGAAATCCAACACTTCGTTC
ACTGGTAGGATATGACGATCCC
GenBank Accession CC794878 [GenBank]
Graphic View Graphic view of gene At4g09420
Predicted Position of Insertion Chr4:5962734 - go to primer design
BLAST e Value 1e-123
Hit Clone Code (BAC ID) T15G18
Hit Gene Code At4g09420 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Disease resistance protein (TIR-NBS class)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37