DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_063974c
Line Availability available from NASC (N662734) and ABRC (SALK_063974c)
Confirmed for Hit At1g20780
Parent of DUPLO pair 216
Parent of pair(s) none

Gene hit At1g20780

Sequence (A. th genome BLAST matches underlined)
GATACGGCATATACTAAACGTTCTGAGGGAGAACCGAACAGAGAGGCTGACAAGGAGAGC
GGTTTGGATGGTGGAAAGGATCTTGCGGATTGAAGACATANNAAGAGAGGTGGNAGAGGA
ACAGAGNCTGAGCGCTGCACTTGTGGACGCTTTCCAAAACGCTGATTTTAGAACGAGACA
GATCGCTGAGAACGCGCTGAAACACATTGATAAGATCCCAAACTTCTCAAGCATATTCCC
ACACATCGCATAGGGAAAATCTCTTTGAAACTGTCCCGCGAGCTATAGTGA
GenBank Accession ED594308 [GenBank]
Graphic View Graphic view of gene At1g20780
Predicted Position of Insertion Chr1:7220357 - go to primer design
BLAST e Value 1e-142
Hit Clone Code (BAC ID) F2D10
Hit Gene Code At1g20780 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation senescence-associated E3 ubiquitin ligase 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details