DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_080154c
Line Availability available from NASC (N678712) and ABRC (SALK_080154c)
Confirmed for Hit At5g43590
Parent of DUPLO pair none
Parent of pair(s) 2816, 96598, 96599, 96600

Gene hit At5g43590

 
Sequence (A. th genome BLAST matches underlined) 
AACAGCATGCGTGGAGCGCCATGCGTGCGACTCTACTGACCGCCCCACTACAGTGTAAAA
ACAGTCAGATCATTTAGTTGTTGATCTTCTTCTTTTTTTTTGGGTTTCAAAACCAATTTT
TAAATTTAAACTTTTACAACCCAAAAAAAAAACAAGTCATTAACTAATTAGGGCCCAGGG
GTTGATGACCCCCTTTGTTGGCCAAAATCACCAATCAAAGGCTTTTCACGGGGTTTCAAA
ATTACCCCCTATTAACAATTTCAGGGGGAAAAAAATCCAAAATTTTGGAATTGCACCGGG
NCNNTTCAAACAAAAA
GenBank Accession CC054839 [GenBank]
Graphic View Graphic view of gene At5g43590
Predicted Position of Insertion Chr5:17511745 - go to primer design
BLAST e Value 4e-23
Hit Clone Code (BAC ID) K9D7
Hit Gene Code At5g43590 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein
Insertion Classification 5' region
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37