DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_086656c
Line Availability available from NASC (N656717) and ABRC (SALK_086656c)
Confirmed for Hit At5g67340
Parent of DUPLO pair 2667
Parent of pair(s) none

Gene hit At5g67340

 
Sequence (A. th genome BLAST matches underlined) 
AATGCGATATGATAATACCGGGCCGGGGAGCACACGAGCCCTGTATGTAGTCGATATTAC
ATTACAAGNNNNNGCNNCNNGGNGCCTGANNNNNANTNNGATCCTNNNGAAAATATNCAC
AGAGACAGATCATTGAGTTTACCTCAAAAGAAGGTGAGATCAAGTCAGCAGGCAAATGTT
GTTCGCAGTGTTTGAGGAGCTGAAAGACTTCCAAACTGGATTCTCGTAACTTTGATGCTA
ATGATTCAATTCGAAAGAGACTGAAAACAGACAAGAGTTAGCTCAGAAACAGCTATAAAT
GAAGATGTAAATTCTGTTTTTTGCATACTTACATAAAAGATTCTAGTTGAGAGAGGTTGC
CAACTCTGAAACTGTTCTCTAAGTTCAACAACGTATTGAGGTAATTCTTCTGAACCATTG
TTAAGCAACTCGGCTGGAGCCGCGTCAGAGTCAATGAGG
GenBank Accession CC455779 [GenBank]
Graphic View Graphic view of gene At5g67340
Predicted Position of Insertion Chr5:26865597 - go to primer design
BLAST e Value 1e-166
Hit Clone Code (BAC ID) K8K14
Hit Gene Code At5g67340 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ARM repeat superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37