DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_110809c
Line Availability available from NASC (N663654) and ABRC (SALK_110809c)
Confirmed for Hit At5g48250
Parent of DUPLO pair 2438
Parent of pair(s) none

Gene hit At5g48250

 
Sequence (A. th genome BLAST matches underlined) 
CTGAGGATAAAACCTCCAAACAATGAAAGATCACAAAGTGGAGATATAAGACAGAGATGC
AACTAATTGGCAGCGATGGATCTGGAAGCCATTATTGGTTGAAAAGGAACACGAGTTCTC
CGCCTCAAAAGCGTCATACTTGCTTAAAAAGGCGCATGCTTCTGCAGTTCTGCCTCATTT
TTTGCATAAAGATTGGTATCTTCCTCTGGCATTTGGCATCATGACTTGACTGGGAAACTA
AAAACTCTTCTACAAATTTCGGGGCATGATCCCTAAATTTTG
GenBank Accession BZ665161 [GenBank]
Graphic View Graphic view of gene At5g48250
Predicted Position of Insertion Chr5:19561722 - go to primer design
BLAST e Value 1e-125
Hit Clone Code (BAC ID) MIF21
Hit Gene Code At5g48250 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation B-box type zinc finger protein with CCT domain-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37