DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_116695c
Line Availability available from NASC (N653615) and ABRC (SALK_116695c)
Confirmed for Hit At1g77440
Parent of DUPLO pair 229
Parent of pair(s) none

Gene hit At1g77440

 
Sequence (A. th genome BLAST matches underlined) 
CATTTCATCACNAGTCTGTTTACAATGCACTTCTTAAAATGATGACCTTGAAATTCCAAC
TTTATCGAAGCAGTACTATGGCAGGGAAGTAATCGCAATATTGAAACATCTTAATCCTAA
GCCAAATTAAAATATACAGAGAAAATTATTGGAGTTACGTCATATATCACCAGCACTATG
CACACAAATATTCCTACCAGATCAAGATTCTACAATAGAATACTTACATATGAATGATCC
TACCAAATTTTCAGGTGATAAACACACATTTGAGTATCCAGTGAATCGGTACAAAAACAA
GTTTTCAGAAAGCACATACCATATCTGGTTTGAACATGGCTT
GenBank Accession BZ381429 [GenBank]
Graphic View Graphic view of gene At1g77440
Predicted Position of Insertion Chr1:29097771 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T5M16
Hit Gene Code At1g77440 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation 20S proteasome beta subunit C2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37