DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_147280c
Line Availability available from NASC (N681852) and ABRC (SALK_147280c)
Confirmed for Hit At1g16500
Parent of DUPLO pair 168
Parent of pair(s) none

Gene hit At1g16500

 
Sequence (A. th genome BLAST matches underlined) 
ATTTGTCAACAGTTTCTTTCTCGATCAGGAGCTGTGCAAGCTGCAGCCGGGCNNCGTCAT
ACCAAAAANGTTCTTTCTNGATCACGAGCTGTGCGGGCTGCGGCCCGGCCCGCACGACCA
ATTGCCTGCTATGAAGAANCCTGAGATTGATCTTAACATTTGCATGCGAAAAAAACATTG
GGGGATAGAATTGAATGGTTTTATTTTGGAGGCTCAATTTATTTCTATGGCACATCCCAC
CCGGGGGTTCNAGGAACTGGTTGGTTGTTTTGGTCTNCACGATAATAAAGAAAATTAGGG
GGGGGGGGGAGGGGCTTCTCTCCTTCTAATGGAGCTGGGAAAANCCGAACCCTGGTTGAC
TTTAAAAACCAGAGGGATCTGCACTCAATTAAATCTTNGCAAGCTGANTGAATTGTTT
GenBank Accession CC798676 [GenBank]
Graphic View Graphic view of gene At1g16500
Predicted Position of Insertion Chr1:5639948 - go to primer design
BLAST e Value 2e-13
Hit Clone Code (BAC ID) F3O9
Hit Gene Code At1g16500 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation filamentous hemagglutinin transporter
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37