DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_148352c
Line Availability available from NASC (N670245) and ABRC (SALK_148352c)
Confirmed for Hit At2g02080
Parent of DUPLO pair 6790
Parent of pair(s) none

Gene hit At2g02080

 
Sequence (A. th genome BLAST matches underlined)
CGCATCAGGATCTGTTTCATATAATTAAAGAATTTAATCATTTAAATTAAGTCACCAATT
AGACCCAAAATGTCAATCTATGTAGACTATATCGAAAAAAATGATACACACACATGTAAA
CATAAATCAAATGACATATACACGTATAAACATATAAGATATACTGGCCTGTCAATATAT
ATGAAATCTTGATACTAGCTAGATATACAAAACAAAATAGAACAAATGATTAGGGTTCTT
TTTCTTCTTGGTATTATCTTAAAGCTGCAGCCCGAGAACCGCCGACCAAAAANNNNNTNN
TTNTNTCGCTTTTTGATTTTTTATATCCGGCGCGCCCCACCACTTTCCGTCTTCTGCCTC
CNNTCTTTTTCTCCTTTTTCTTCTCTCCCCTCGCCCGCGGGGCGCCGTTTGGTGTGGTTG
GCTGCCCTGGCTGCCGTGTTTTTTTTGCCCCCNTAGGGCCGCCACAC
GenBank Accession CC886225 [GenBank]
Graphic View Graphic view of gene At2g02080
Predicted Position of Insertion Chr2:520650 - go to primer design
BLAST e Value 1e-136
Hit Clone Code (BAC ID) F5O4
Hit Gene Code At2g02080 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation indeterminate(ID)-domain 4
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37