SimpleSearch - Line and FST details
Line specific information
Line ID | 770C01 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N473849) |
Segregation Analysis | 50:49:49 |
Confirmed for Hit | At5g12370 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit F23K16
Sequence (A. th genome BLAST matches underlined) | >03-K023591-022-770-C01-8409 AGCCATTTGCAGAGATGATGATATTGAAGCACCCTTATAGCGTCCTATTGTCCCAGATGA CTCTGAGACTTGCTGACTCTCAGCACGCAGTTCTTCCATCTGTAAAGAAGAACTCATTCA CTTCACATTAATGAACAACATAGCAACTATGGGATCCTCCCTATAGTGAGTCGTATTACT CACGGGGTTACTCGGGATTGGTGACACATAGTTCCTTTAGCTGTTGAAGGTATCGTTGAG CGAAATTTTGTATTTGTCTTTGCTGCGTTTTTTTGAAGAGTTTAAATTTCCTTTTGTCAT TAATAGAATGCTTTTTCGGCCAAATTTTTGTTACCACAATTTTAATGATAAAAACTTTAA ATTTTTCAAAAGTGGACTACTTTCGTATACCCAATATTGTCNCCCAAACCAATCAACCAG ATTATC |
GenBank Accession | BX897576 [GenBank] |
Graphic View | ![]() |
Predicted Position of Insertion | Chr4:18332267 - go to primer design |
BLAST e Value | 2e-60 |
Hit Clone Code (BAC ID) | F23K16 |
Insertion Classification | Genome Hit |
Confirmation Status | unknown |
Gene hit At5g12370
Sequence (A. th genome BLAST matches underlined) | >03-K023595-022-770-C01-8409 AATCCGGAAGCAGCCATTGCAGAGATGATGATATTGAAGCACCCTTAGAGCGTCCTATTG TCCCAGATGACTCTGAGACTTGCTGACTCTCAGCACGCAGTTCTTCCATCTGTAGAGAAA AACTCATTCACTTCACATTAATGAACAACATAACAACTATGGGATCCTCCCTATAGTGAG TCGTATTACTCACGGGGTTAGCCGGAATTGGTAACTCGGGGGGCTGCTCCCTATAGGGAG ATTAAGGGATATCGGCCAATTGGGAGCACAAGGGAACGGGGTGCGAGGGGGGTTGGGGGG CTGC |
GenBank Accession | BX897577 [GenBank] |
Graphic View | ![]() |
Predicted Position of Insertion | Chr5:4005603 - go to primer design |
BLAST e Value | 4e-55 |
Hit Clone Code (BAC ID) | T2L20 |
Hit Gene Code | At5g12370 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | exocyst complex component sec10 |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |