SimpleSearch - Line and FST details
Line specific information
| Line ID | 006A03 |
| Vector Used | pAC106 |
| Line Availability | available as T3 set from NASC (N400483) |
| Segregation Analysis | 100:95:72 |
| Confirmed for Hit | At3g02130 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At3g02130
| Sequence (A. th genome BLAST matches underlined) | >13-K029297-022-006-A03C-3144 ATCCACTATCCTTCGCAGACCCTTCCTCTATATAAGGAAGTTCATTTCATTTGGAGAGGA CAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCGGTTTAAACTATCAGTGTTTCC CCAACAAGTCTCGGGGATCTAGCTTCACTTGTTGCTCTTAATCTGAGCTGGAATCAGTTG CAAGGTCAGATACCGGGTAGCCTCGGGAAGAAGATGGCAGCTTTGACATATCTTTCGATT GCGAATAACAACCTCACGGGGCAAATTCCTCAGAGCTTTGGTCAGTTACATTCCTTGGAT GTTCTTGATCTCTCTTCAAATCATCTATCTGGCGGTATTCCTCATGATTTCGTAAACTTG AAGAATCTCACTGTCCTGCTTCTCAACAATAACAACCTCTCTGGCCCAATCCCGTCGGGT TTTGCGACATTTGCTGTTTTCAATGTTTCCTCCCAACA |
| GenBank Accession | HG968547 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr3:382603 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F1C9 |
| Hit Gene Code | At3g02130 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | receptor-like protein kinase 2 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | HG968547 [GenBank] |
Gene hit At5g56500
| Sequence (A. th genome BLAST matches underlined) | >17-K014808-022-006-A03-8409 NTGATCCATGTAGATTNTCCCGGACCATGAAGCCTTTAGACATTGATAATAAAGCATTGA TCTATCCCACTGAAGATAGTCGCTCTAGAACGCTGGTGTCTATGGACATGCGGCTGTACA ATGAGAATGGCATCCCTCTCTCTTGAAAGAATGCGCCATTGAGTCTTTTGATATAGAAAC TAGCTTCGATGGCTTTTCTAGGATGACATGGTGCTTTCTATGGGATCCTCCCTANAGTGA GACGACGGAGCAGCATTCCAAAAAGATCCCTTGGCTCGTCTGGGTCGGCTATGGGATCCT CCCTTNAGTGAGANNAAANNNNCCCGGGNANNTTTTCCCCCACCTAACCAATTTTNAAAA GCAAAAATGTTTAAGTTAAAATTCTTTTGC |
| GenBank Accession | FR799889 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr5:22876419 - go to primer design |
| BLAST e Value | 4e-04 |
| Hit Clone Code (BAC ID) | MCD7 |
| Hit Gene Code | At5g56500 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | TCP-1/cpn60 chaperonin family protein |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
