SimpleSearch - Line and FST details


Line specific information

 
Line ID 012H08
Vector Used pAC106
Line Availability available as T3 set from NASC (N401148)
Segregation Analysis 60:56:44
Confirmed for Hit At4g19700
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At4g19700

Sequence (A. th genome BLAST matches underlined)
>64-K012438-022-012-H08-8409
NTTTGATACCATGTAGATCTTCCCTTACATGAGAGCCTTTACACTTGAATATATCCTGAT
CAATCCCATAGATTTCTTCACCAGTCGCCACAACTCCTCCCTCTTCTCTCTCTCTTTGTT
GCGGAATCTCTATGGGATCCTCCCTATAGTGAGTCGTATTACTCATTTGTTTGCACCCAT
CATGACCATCATACTCATTGCTGATGGACGTGGATGACCCTAGCGTGGGATCATTGTGAA
AGTAGATGTTGGTATGCCCGCGACTATGTATCCGGGACCTGGACTATGAGAACGAGGAAA
CGACCCTCTGCTGTCGCTACATGCTTTATCGCGACGTGACCTCCAATTCTCGTCTGTACG
AGCGAGAATGCATCGGCCGGTATGGTGTACTCCTACCGCTACAACTCTCTGCCGCGTATA
CCTGACCGGACCTCAAGCCAGGTAGACTATTTCGATGGGACGCTTCCTATAATGCGATGT
TGGACTCATGCTGTGCAATTATAGAATTTATGTCATAATTCTGTTTGACACTAATTATTT
GAACCAAACTGCATCATTTCCCTGCTAAGAAGTTTTAATAGAGACACTGTATCATCTGAA
TGTGATGTATGATTCATGAAAAATGTTGTGGTTTTCCCGTTCATCTCGATTTTGCTCCAT
CCCGGGAGCTTTTTCAAGGCGAGAGACCCCCTCTGGAGCCATGAATCACTCCCCTGGTCC
CATCTCTTCATCGCAGGCAAAGAATGTCCTA
GenBank Accession AL752439 [GenBank]
Graphic View Graphic view of gene At4g19700
Predicted Position of Insertion Chr4:10714728 - go to primer design
BLAST e Value 1e-13
Hit Clone Code (BAC ID) T16H5
Hit Gene Code At4g19700 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation SBP (S-ribonuclease binding protein) family protein
Insertion Classification TS2TE (5')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details