SimpleSearch - Line and FST details


Line specific information

 
Line ID 015F09
Vector Used pAC106
Line Availability available as T3 set from NASC (N401413)
Segregation Analysis 50:48:35
Confirmed for Hit At1g74850
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At1g74850

Sequence (A. th genome BLAST matches underlined)
>70-K019122-022-015-F09-8409
ATTTCAGGTGGTTTAGATTGGGAGGGTTATTGGGTTTGTTTGCAGAGATGAGACATGAGG
GGATACAACCTGATATCGTGACTTATAATACACTGCTTAGTGCTTGTGCTATTAGAGGTT
TAGGTGATGAGGCTGAAATGGTTTTTAGGACTATGAATGATGGTGGGATTGTTCCGGATT
TAACCACATATAGTCACCTATGGGATCCTCNNCTATAGTGAGANNNNNNNNNNNNNNNNN
NNNNNNNNNNTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTT
TTTTTTTTTTTNNNCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNCNNNNNNNNNNNCNCN
CCCCCCCAAAAAAAAAAAAAAACNGGGGGGGGGGGGGGGGNNCCCCCCCCCCCCCCCCAC
CCCCNNCNCCCCCCCCCCCCCACCCCCCCCCCCCCNNCANCACACCCCCACCAAAACGGC
AAAGCCCAACGGGAGCCGCCCAACAACAGGGAGGACCCCCCCCCCNCAAACAAAAAAGGC
CGCGGGCCACCCCGGGAAGAAAACGGCGGAGAGGGGGCGGGGCGCCGAGACGCCCCGGGC
GCCGGCGACGCCCGCAAGAAGGGAGCGGGGGCGCCAGGCAGAGCGCACCACCCGGCGACG
CGCAGGCACGCGAAACCCCCCAGCAACCCAACACGGCCACACACCAAGCCCGGAGCACAC
AACGAACAGAAAAGAGACCAGCGCAACAAACACCGAGAGGCGCGCCGCCGCCACCCCCGC
CACAACAGAGAAGCGCCAACGCGGCAGCGAAACGCGGCCCGCGCCCCGGCGCCGCGAGCG
AAAAAANCGCCNCACGAANGAAACCNACCCCACCAACCCCAGCGCGCCACCGCCGNANCA
CCACAAACCAACAGCCGACGACGACGCAACAAAACCA
GenBank Accession BX284998 [GenBank]
Graphic View Graphic view of gene At1g74850
Predicted Position of Insertion Chr1:28121646 - go to primer design
BLAST e Value 1e-99
Hit Clone Code (BAC ID) F25A4
Hit Gene Code At1g74850 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation plastid transcriptionally active 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details