SimpleSearch - Line and FST details
Line specific information
| Line ID | 017E03 |
| Vector Used | pAC106 |
| Line Availability | available as T3 set from NASC (N401587) |
| Segregation Analysis | 50:46:38 |
| Confirmed for Hit | At3g22520 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At3g22520
| Sequence (A. th genome BLAST matches underlined) | >21-K013489-022-017-E03-8409 CATAAAGTACATAGCTTTTTACGTTACTGCCGATAATTGGGCATTCCGAATTCTCCTTTT TCTCAATTTTCCTTACACGGGTGTTCCTCTTCTGCAGGAAATTATGTCTTGAGAGGTCAT GTCTGCTCCTATCTATTCTCCGATAGATATGCAGGAGATTGATCAAAATCCTACTGGGAT AATTCTTCTTTTCTGATAACTATGCATTAAATGTGAACAAAAACTTGTTTTGTCTCTGTT TGTTTTGGTTATCCTGTGTCTGAATCTTTGCTTTGATTTCTTGAACAACTTAGACCTTTT GATGGGTTTATGTCCGGAAATGAGACCAAATTAGTGTTTAGCTGATATCTGTTCAAAATT CTGACCTAAGCACAAAAAGTTCTTGAGTTTAGATGAGAGAAGATTAAATTGTTTAGAGGA ACATTTTTGTCTTTGGGAAATGTGTGAAACTTACGTTGAGCAAAAGTTAGGGTTCTTATT CTAATTGCTGCTACCATAAAGGATGTGGCTTTAAGGTTTGAAAGTCTCCATATTTTGTTA TTCATTATGCCTGAGTTTGCTTGTTTCAACACTACGGAATAATGAAGTGGTTAATACATT GGTTGGTAACATGGTTTAATGG |
| GenBank Accession | AL752792 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:7974816 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F16J14 |
| Hit Gene Code | At3g22520 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | spindle assembly abnormal protein |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | AL752792 [GenBank] |
Gene hit At2g31800
| Sequence (A. th genome BLAST matches underlined) | >77-K017012-022-017-E03T-8409 TGATCTGANATTTCCCGGACTGAAGCCATTTACATTGAATTGTGGAGTTCTCACGATCTT ATGTACTATTTCCTGAGAAATCATACATTTGGGTGAGAGAAAAAATCATGATATATATAA AGAGCTGTGGCCCTATGGGATCTCNCCTATAGTGAGATATGTGCATGCCAACCACAGGGT TCCCCTCGGGAGTGCTTGGCATTCCGTGCGATAATGACTTCTGTTCAACCACCCAAACGT CGGAAAGCCTGACGACGGAGCAGCATTCCAAAAAGATCCCTTGGCTCGTCTGGGTCGACT ATGGGATCCTCCCTATAGTGAGATTCCTTTATCGCAATGATGGCATTTGTAGGAGCCACC TTCCTTTTCCACTATCTTCACAATAAATGCCGTTGTAAGCGCCGCTGCCGCTTTGCACCC GGTGGAGCTTGCATGTTGGTTTCTACGCAGAACTGAGCCGGTTAGGCAGATAATTTCCAT TGAGAACTGAGCCATGTGCACCTTCCCCCCAACACGGTGAGCGACGGCGCAACGGAGTGA TCCACATGGGACTTTTAAACATCATCCGTCGGATGGCGTTGCGAGAAAAGCAGTCGATCC TGGAAATCAACCAGCGCAACGGGCAGGCGCCCCTATCCTACCCTCGAAAGGTGATAGGGC AGAAATTTGAATGATGCGGCCCCCGCACAAAGGCCAT |
| GenBank Accession | AL936071 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr2:13520588 - go to primer design |
| BLAST e Value | 5e-34 |
| Hit Clone Code (BAC ID) | F20M17 |
| Hit Gene Code | At2g31800 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Integrin-linked protein kinase family |
| Insertion Classification | TS2TE (3') |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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