SimpleSearch - Line and FST details


Line specific information

 
Line ID 026E11
Vector Used pAC106
Line Availability available as T3 set from NASC (N402459)
Segregation Analysis 50:49:41
Confirmed for Hit At5g48100
Parent of DUPLO pair none
Parent of pair(s) 5930, 5952, 5984, 6012, 6018, 89294, 89354, 89368, 89371

Gene hit At5g48100

Sequence (A. th genome BLAST matches underlined)
>85-K013727-022-026-E11-8409
TAAGTGGTATATACAAATGGGCTTTAGACTACCAATGCATTGTGATGTTTTCGCTATGGG
ATCCTCCCTATAGTAGAGATCGGATATTTAAAAGGGCGTGAAAAGGTTTATCCGTTCGTC
CATTTGTATGTGCATGCCAACCACAGGGTTCCCCTCGGGAGTGCTTGGCATTCCGTGCGA
TAATGACTTCTGTTCAACCACCCAAACGTCGGAAAGCCTGACGACGGAGCAGCATTCCAA
AAAGATCCCTTGGCTCGTCTGGGTCGGCTATGGGATCCTCCCTATAGTGAG
GenBank Accession FR800702 [GenBank]
Graphic View Graphic view of gene At5g48100
Predicted Position of Insertion Chr5:19492233 - go to primer design
BLAST e Value 3e-14
Hit Clone Code (BAC ID) MDN11
Hit Gene Code At5g48100 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Laccase/Diphenol oxidase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details