SimpleSearch - Line and FST details


Line specific information

 
Line ID 034C05
Vector Used pAC161
Line Availability available as T3 set from NASC (N403197)
Segregation Analysis 100:76:70
Confirmed for Hit At5g47840 At2g31080
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At5g47840

Sequence (A. th genome BLAST matches underlined)
>16-K028095-022-034-C05C-8409
CCATTTACAATTGACGGGTACACTCTCTTTACCGGCACCGACGTGTATCAAGATCTCCGT
CGATTATCGCTCCCAAATTTCAGGTGAATGATTGTTTTGACCTCCGATTTTTGAATGCGA
TTTGCGAGCTTGTAATTTTGGATTTTATTGTGTGTGGAAGGAATATAGATTGTGGCGGCT
GAAAAATCGGAGCCTCTGAAAATTATGATATCAGGAGCTCCTGCTTCTGGTAAAGGTACA
CAATGCGAGCTGATTACTCACAAAGTAAGCTTATTGATCTTGTTATTGGATACTATTCTC
ATGAACCCAATTCAATTTGAAAATACTTTGATCGATTTTGTCAATGAACCTTAACTCGGC
CACTTATAGCATTGCATGAGCTGATTCAGGGGGTTCTCTAGTAATGATATCAAGCATTAA
ACCATTTTTTTGGCTGTATTTTGTGATGATGACTACGTTTTAGTGCTCTTTTATGAAGAG
GTTAACATGCTAAAGTAAAGCTTAGGTTGTTGAATAAGTAAGGAAAATCGTGCTCTTAAT
TTAAAACAAAAACCCGTGTTTCTGCAGAACTTGCTACTCATTTTTACGGATAATTTTTAT
GTTTCTGTTTTCATGGAAGACGTCAAGCT
GenBank Accession HG968616 [GenBank]
Graphic View Graphic view of gene At5g47840
Predicted Position of Insertion Chr5:19375588 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MCA23
Hit Gene Code At5g47840 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation adenosine monophosphate kinase
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details