SimpleSearch - Line and FST details
Line specific information
Line ID | 075E02 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N407154) |
Segregation Analysis | 60:53:50 |
Confirmed for Hit | At5g48720 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At5g48720
Sequence (A. th genome BLAST matches underlined) | >13-011890-strizhov-E2-8409 TTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGAATCT ACAACATCCATCATGAGGAGATTTTCACATACTAGTGGGATACTCCCTAGAGTGATGCGT ATATACGAAATATATTCTAAATTATGTATAAAGTTTGATAGATCCCAAGGGACCCATAAT CTCGTTCCCCAATGAGCGATCTATGGGATCCTCCCTATAGTGAGTCCCATTACATCAAAC ATATTGTTTTTTTAATATCAAAAACGCAACATCCCAACCTGTTATCTGTCCATGTAGCAC CATGTTGACTAAAGAGGGACTCTCTAGAATCCTCATTATAGAGAGATGATTTAGCATTGA CAAGCTAAAATCCAAATCCTAAATGATTGATGAAACATTAAATGACCAAACATTTCTTAA CTCACAATTAACATCAAATCCAACATTTCATCTTCGCATTAAAAACACAGAAATCAATCA AAACCTAAAACCCAGTAACCACCACCAAATCTAAGCGAAACCACAACGATTACAGTGAAA CCCATACAAGAGAACACACGAATCAGACTAAGAAAGCCCCAAAACACACCAAAATCGAAG AATGTACTAATCAATCCAACCCACAATCCCAACGAGAAAACAAAAACCAGAAACCCTTTC AAATCCAAAATAAACCCAATTCAGAAGAAATAAGCACCGATAAAAGAGAAAATCTACCGA TCGTCGTCTCCGTAATCCCTCGATCTTCTTCTTGCCTCTACAACT |
GenBank Accession | AL768512 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr5:19759915 - go to primer design |
BLAST e Value | 5e-173 |
Hit Clone Code (BAC ID) | K24G6 |
Hit Gene Code | At5g48720 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | x-ray induced transcript 1 |
Insertion Classification | TS2TE (5') |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |