SimpleSearch - Line and FST details


Line specific information

 
Line ID 079F05
Vector Used pAC161
Line Availability available as T3 set from NASC (N407553)
Segregation Analysis 50:27:15
Confirmed for Hit At4g33810
Parent of DUPLO pair none
Parent of pair(s) 1705, 97618

Gene hit At4g33810

 
Sequence (A. th genome BLAST matches underlined) 
>38-011918-strizhov-F5-8409
TTCCTTATCTGCATAAACATAAATATGTAATACCCAAAACATCTGGCCTGACCGGCCTTA
AAAAAGCTTGGGACTCCTCCCTATAGAGAGTCTTGCGAAGGATAGTGGGATTGTGCGTCA
TCCCTTACGTCAGTGGAGATATCACATCAATCCACTTGCTTTGAAGACGTGGTTGGAACG
TCTTCTTTTTCCCGATGCTCCTCGTGGGTGGGGGTCCATCTTTGGGACCACTGTCGGCAG
AGGCATCTTCAACGATGGCCTTTCCTTTATCGCAATGATGGCATTTGTAGGAGCCACCTT
CCTTTTCCACTATCTTCACAATAAAGTGACAGATAGCTGGGCAATGGAATCCGAGGAGGT
TTCCGGATATTACCCTTTGTTGAAAAGTCTCAATTGCCCTTTGGTCTTCTGAGACTGTAT
CTTTGATATTTTTGGAGTAGACAAGCGTGTCGTGCTCCACCATGTTGACGAAGATTTTCT
TCTTGTCATTGAGTCGTAAGAGACTCTGTATGAACTGTTCGCCAGTCTTTACGGCGAGTT
CTGTTANGTCCTCTATTTGAATCTTTGACTCCATGGGAATTGGGGATCCTCTATGGGATC
CTC
GenBank Accession FR802336 [GenBank]
Graphic View Graphic view of gene At4g33810
Predicted Position of Insertion Chr4:16214563 - go to primer design
BLAST e Value 3e-17
Hit Clone Code (BAC ID) T16L1
Hit Gene Code At4g33810 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Glycosyl hydrolase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR802336 [GenBank]


Last Updated on 10.06.2021 13:37