SimpleSearch - Line and FST details


Line specific information

 
Line ID 096D09
Vector Used pAC161
Line Availability available as T3 set from NASC (N409165)
Segregation Analysis 50:45:33
Confirmed for Hit At3g12160
Parent of DUPLO pair none
Parent of pair(s) 1091, 6602, 6605, 6606, 6607, 6611, 6614, 86493, 86639, 86776, 86866, 86926, 86953, 87030, 87054, 87077, 87079, 87080, 87081, 87083, 87085, 87086, 87088, 87089, 87093, 87095, 87096

Gene hit At3g12160

Sequence (A. th genome BLAST matches underlined)
>68-012024-strizhov-D9-8409
TATCTACTTATATTGAAACATGTGCTGCCTAATTCAATGGGCTCTCTATGGGATCCTACG
CCTATAGTGAGTCAGTATATACTGACGGTGACAAGTGCATACTACCGTGGAGCAGTTGGG
GCAATGTTGGTCTACGACATGACCAAACGTCAATCATTCGATCACATGGCTAAATGGCTG
GAAGAGTTACGAGGACATGCGGACAAGAACATAGTGATTATGCTAATTGGGAACAAATGT
GATCTTGGAAGCCTAAGAGCAGTGCCAACAGAAGACGCACAAGAGTTTGCACAAAGAGAA
AACTTGTTTTTCATGGAAACCTCTGCTCTATGGGATCCTCCCTATAGTGAGTCGTATTAC
TC
GenBank Accession AL770081 [GenBank]
Graphic View Graphic view of gene At3g12160
Predicted Position of Insertion Chr3:3880006 - go to primer design
BLAST e Value 5e-136
Hit Clone Code (BAC ID) T21B14
Hit Gene Code At3g12160 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RAB GTPase homolog A4D
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details