SimpleSearch - Line and FST details


Line specific information

 
Line ID 100A02
Vector Used pAC161
Line Availability available as T3 set from NASC (N409506)
Segregation Analysis 50:45:44
Confirmed for Hit At5g13150
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At5g13150

Sequence (A. th genome BLAST matches underlined)
>09-012073-strizhov-A2-8409
CTATCTTATACTAGTAGAGCGTTTTTGGCCTATGGGATCCTCCCTATAGTGAGTCGTATT
ACTCAGATTTCACCTTCGAGAGATTCCCAACCTATTCTCTGCACGTCTTCAACGTTGATC
CCTTCGAATCCAACCTCGGTTAGCTCTTCCTTGAACGCGTGCCGCCTCTACATTTCGTAT
GACATACAACACTCTGCTTCGTAACCGGCGGAGATCATCGCTCCGGCGATCTTTTTCAAC
GTCGAGATCGATTCCGGCGAAAAATCATGGAAACTCTCTTCCTCTGCCTACTCATGGTCT
TGTAAAACGCATCGATCTGAATCATTTGTTGAAAGAATTGTTGTGATCGGAATTGCTCCC
GTCGTGGTGCATGTAGCTGGTGTTGTTCTTCTTCTCCTTCCTCTTGGGACGATCTATGGG
AATCCTCCCTATAGGGAGTCCTATTACACTAAGGGAATGCCGCTTATAGTATTATTGCGT
TAAACGCCTATGTATGTGATCAGAACGACGGNGCAAGGAAACAACACGAGAGATCGAACT
CGGTCGATAGAGATACACACCAATTAGAGGGGAGAAAAAATAGCAAGAAAAAGAGACACG
CCGTGCTAACCCCACATTCAAAAATCATAA
GenBank Accession AL755609 [GenBank]
Graphic View Graphic view of gene At5g13150
Predicted Position of Insertion Chr5:4173953 - go to primer design
BLAST e Value 7e-160
Hit Clone Code (BAC ID) T19L5
Hit Gene Code At5g13150 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation exocyst subunit exo70 family protein C1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details