SimpleSearch - Line and FST details


Line specific information

 
Line ID 113F11
Vector Used pAC161
Line Availability available as T3 set from NASC (N410823)
Segregation Analysis 100:98:71
Confirmed for Hit At4g30870
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At4g30870

Sequence (A. th genome BLAST matches underlined)
>86-K012505-022-113-F11-8409
TTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTAGTGGA
AGCCTTTGGTATACTGACGCTATAATGACTAGGATTACTAATTTTGATACTGCTGTTGAA
AGTTCTGAGCAAGAAGATTTACCTGATAATCATGCTGGTACTGGTGATGGGCTGTTGGCT
GCATATATATCACATTGTACACATGTATAACCAAAGTAATGTCTTTATGTATGCTGAATT
TTAACCTGTTCAGGGAAAACGGCCAATGGAAAAAAACGGAACATTCCGCAGAGAAACACA
GTGGGATATGCATTACTAATAACGTCGCACAGGTTAATTACATGTTGATGATACTGACAA
AATACTCTTTCTTTCCCCTCTGTAAACCCTTCTTCAGTACCAGGAAGAGTTATTTCGAGT
TACCAGAACGACTACAAATGGGAAAGAATTCATGCGTAAACAAGAGCTTATTGATGCTGC
TGACACAAATGGGCTATCACACGCTCCTGTTGGGTATGAAACACTCGTGATGCTCCCAGA
ATATAATATATTGGCCTATGACCCAACCTCTGCTGTAAGTCTTATTCATCCATTACGAGT
GAGCATTGACTATCGGATCCTCGCTATGGAGAGTCTAATAACTTATGAAAGAGGACCCAT
TTTTTACCCTGAAAAAAATCTAAATTTTGCGAATGAAAAATACT
GenBank Accession BX890757 [GenBank]
Graphic View Graphic view of gene At4g30870
Predicted Position of Insertion Chr4:15029336 - go to primer design
BLAST e Value 7e-166
Hit Clone Code (BAC ID) T10C21
Hit Gene Code At4g30870 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Restriction endonuclease, type II-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details