SimpleSearch - Line and FST details
Line specific information
| Line ID | 122F10 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N411686) |
| Segregation Analysis | 50:33:30 |
| Confirmed for Hit | At2g16940 |
| Parent of DUPLO pair | 1842 |
| Parent of pair(s) | none |
Gene hit At2g16940
| Sequence (A. th genome BLAST matches underlined) | >78-K012551-022-122-F10-8409 TGATCCATGTAGATTTCCCGGACATGAAGCACTTTACATTGAATATAGTCCTGAACTCTT ACGATCACTCCGATTACTATAAAAGCAGCTGACCTTATACGCATGTGTCGGATACCACCA CTTTTTTGAGATGACAGGAAGCATATACGTGGCTTCAAACGAGATTAGCTTTCACTCACA TGCTATGGGAATCTTGCTATAACGATGAATAACACTGAGCGATAAAGATAAACCGGTCGA GCAGATAACAAGCACACTACATAAACTTAATACACAGTTTCTAAAGTGTGAACTATGGAG AAATACATATAGTGTGAAAGTGAACACCATCTACGAAGTAGCACCTACCAGAAAGAAGGC ACCAGATCTTAACGGAAATGGCCTATGATAAAGAGGATGAGACATTTTGGAGAACAAGGT TGAGATAGATACTAGAGAGAGAGAAGGATCGCCTGCGATCTCTATCCCGGGCCTTGCTCT CTCTTTCCTTAGGTTCTATTGCCAAGCTCTTTTCTCTTTCCTGACTCCGATGTCGCTCTG ATCGACTTCTACTTCTTCGTGACCGATCTTTTTCATGGCCACGCCCTGTACTGTCTAGAT CCTTATCTCTGGCCCTCTCTCTATCTGTCCCATTGCTTTGCTCCTTTATCTACATCCTTT TCACGAACTCTATCTCTGTGGCTCCTGGCTACTCTATGGCCAACCCTCTCTCTGGCCCTA GAACGGGCAACGGTGAGGCGATCTCGACCGCTTAAAAACCGCCGACATTCCCCATNTTCA TCCCTTTCCTTTTTTTGGGACCCCCTAGGCCGGGGAGCCCCACTCCTCTTTTTCCCTTCA AAATGGACTTT |
| GenBank Accession | AL764193 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:7346177 - go to primer design |
| BLAST e Value | 3e-119 |
| Hit Clone Code (BAC ID) | F12A24 |
| Hit Gene Code | At2g16940 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Splicing factor, CC1-like protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit T24C20
| Sequence (A. th genome BLAST matches underlined) | >78-K028302-022-122-F10-8409 ATGAAGCCTTTACAATTGAATAATATCCTGAACACTATACGATTCTCTTGGATCCTTAAA TGCAGTGTCGATTCCTCATGGATCAATTTCAGTTCATTTTTTGCACCGGAGCTTGGATAG CAAGGCATTAGACGGGATTAGCTTTCATCCATGCTAGAGCTTATTTCCTTCCAATGATGT ATAACCGTATGGGATCCTCCCTATAGTGAGACNTATTACTCACT |
| GenBank Accession | CR770182 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:17860356 - go to primer design |
| BLAST e Value | 1e-55 |
| Hit Clone Code (BAC ID) | T24C20 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
| Other FSTs Supporting this Hit | CR934642 [GenBank] CR934642 [GenBank] |
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Last Updated on 10.06.2021 13:37 |
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