SimpleSearch - Line and FST details
Line specific information
Line ID | 141G12 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N413524) |
Segregation Analysis | 50:46:31 |
Confirmed for Hit | At5g24670 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At5g24670
Sequence (A. th genome BLAST matches underlined) | >95-K012894-022-141-G12-35St TGACGTAAGGGATGACGCACAATCCACTATCCTTCGAAGACCCTTCCTCTATATAAGGAA GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCG GTTTAAACTATCAGGGTACTCTGCAAGTGTGTGTACCTATGGCGCTTGTGCATCAAAGAA TAAAACGGATTTTCTATGCTTTTCCAAACACCACGGCAGGTGGTCTCGGGAGTGTTCATA GACTTCAAGGGGAAAAGAGTTTGAACCATCATTATGCAGTGTTTAGAGTTTTGCTGCCTG ATGACGCACTTAGACAAATGACCACGGTCTAATGCATTGTTGTAGTCGATTGATAATCAG GTTCTGGGTGAGAAAGCTAATTCTTTGTTCTTGTTCATTCCAAGAATCTGGAATCTTATT GAATTATTATGTAGACCAAAAACTTTCGACTTCTATTACTGTGTATGGCTCAGTACTCTC TATGGGATCCTCCCTATAGTGAGCGTTTTNCCTCAANNNNNNNNNNNNNNNNNNNNNNNN NNNNNNTTTTNNNNNNNNNNTNTNNNNNNNNNNNNTNCCTTCCTTTNNNNNCCTTTTNNN NNNAATCCCCTTNNAANTTCCTNNCCCTTCCCNNTNTTNNNANTTCCAAATTTTTTNTCC CACTNATTCATCCAATAAAATTCCAAATCTTTCAATAAACCAAAACAANAATTAACTTTT TCCCCACACCTNATTATTAATCACTCCACAATTCTTTAAACCTCCTTCTTTTTTTTAATN CCCTTCNNCCCCAAACTTTAACCTCNCAAATAATNNTTCAACTTCTTCCCCTTAAATCAT AACACCCCCCAACCCCTTNCCTCGGTTTTTAAAAAAAAAAAAAAAACCTTTATTCTTTTA TCCAACCCCAGATACCCCTTTTCAAAAACCTCAAATCTTTA |
GenBank Accession | AL765640 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr5:8450870 - go to primer design |
BLAST e Value | 0.0 |
Hit Clone Code (BAC ID) | MXC17 |
Hit Gene Code | At5g24670 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | Cytidine/deoxycytidylate deaminase family protein |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |