SimpleSearch - Line and FST details


Line specific information

 
Line ID 141G12
Vector Used pAC161
Line Availability available as T3 set from NASC (N413524)
Segregation Analysis 50:46:31
Confirmed for Hit At5g24670
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At5g24670

Sequence (A. th genome BLAST matches underlined)
>95-K012894-022-141-G12-35St
TGACGTAAGGGATGACGCACAATCCACTATCCTTCGAAGACCCTTCCTCTATATAAGGAA
GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCG
GTTTAAACTATCAGGGTACTCTGCAAGTGTGTGTACCTATGGCGCTTGTGCATCAAAGAA
TAAAACGGATTTTCTATGCTTTTCCAAACACCACGGCAGGTGGTCTCGGGAGTGTTCATA
GACTTCAAGGGGAAAAGAGTTTGAACCATCATTATGCAGTGTTTAGAGTTTTGCTGCCTG
ATGACGCACTTAGACAAATGACCACGGTCTAATGCATTGTTGTAGTCGATTGATAATCAG
GTTCTGGGTGAGAAAGCTAATTCTTTGTTCTTGTTCATTCCAAGAATCTGGAATCTTATT
GAATTATTATGTAGACCAAAAACTTTCGACTTCTATTACTGTGTATGGCTCAGTACTCTC
TATGGGATCCTCCCTATAGTGAGCGTTTTNCCTCAANNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTTTTNNNNNNNNNNTNTNNNNNNNNNNNNTNCCTTCCTTTNNNNNCCTTTTNNN
NNNAATCCCCTTNNAANTTCCTNNCCCTTCCCNNTNTTNNNANTTCCAAATTTTTTNTCC
CACTNATTCATCCAATAAAATTCCAAATCTTTCAATAAACCAAAACAANAATTAACTTTT
TCCCCACACCTNATTATTAATCACTCCACAATTCTTTAAACCTCCTTCTTTTTTTTAATN
CCCTTCNNCCCCAAACTTTAACCTCNCAAATAATNNTTCAACTTCTTCCCCTTAAATCAT
AACACCCCCCAACCCCTTNCCTCGGTTTTTAAAAAAAAAAAAAAAACCTTTATTCTTTTA
TCCAACCCCAGATACCCCTTTTCAAAAACCTCAAATCTTTA
GenBank Accession AL765640 [GenBank]
Graphic View Graphic view of gene At5g24670
Predicted Position of Insertion Chr5:8450870 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MXC17
Hit Gene Code At5g24670 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Cytidine/deoxycytidylate deaminase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details