SimpleSearch - Line and FST details
Line specific information
| Line ID | 151G05 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N414477) |
| Segregation Analysis | 50:43:32 |
| Confirmed for Hit | At1g03290 |
| Parent of DUPLO pair | 29 |
| Parent of pair(s) | none |
Gene hit At1g03290
| Sequence (A. th genome BLAST matches underlined) | >39-K013133-022-151-G05-8409 TTGATCCATGTAGATTTCCCGGACATGAAGCCATGTACAATTGATATTATAGAAACGATG AGCTAAATAAACCGGTACGTAAACGCTCCATATAGATAGAGGATTGGTTTCCTACTCTTT TAGACAAAACTTGGATTGGGATTTATATGTGGTTCTATGGGATCCTCCCTATAGTGAGAN CAGCTATAGGATCTCTCCTCTTTTTTTTTGAATCCTAAGGAGTGGATAGCCGCAGCACAC CACAGAGACGGGGCAAAAACCACAGCGTAGACTAGGAAGGGCCGGGCGAAGAACGGGGCC GAGGGGAGGCATCGCATATCTGGCACCTCGGGCCGGGTTGAGCGCGACGACCCGAACCCC CTGCACCCCGCCCTTTTCGCCGCCCGGCGACCCCCGCAAGCTAGGCACCCGCACACGCGG AGGTGTACGACGCGCAAGTCCCCCGTAAATGCCGCCAGCC |
| GenBank Accession | AL757710 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr1:810687 - go to primer design |
| BLAST e Value | 1e-19 |
| Hit Clone Code (BAC ID) | F15K9 |
| Hit Gene Code | At1g03290 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | ELKS/Rab6-interacting/CAST family protein |
| Insertion Classification | TS2TE (3') |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit T19C21
| Sequence (A. th genome BLAST matches underlined) | >39-K013138-022-151-G05-8409 TTTGGATCCATGTAGATTTCCCTGACATGAAGCACTTTACATAGCAAATAGATAGGACTG TTCAATTCCGCCTGGAATTAGAAGGATTTGGATGACCTGACAAGGTACATGTTTGGTCAC AACACTCATGAACCACACATTGGGGAAAGAATTATGAAAATTCCTTGAATCGTAAATTAT TTCAGGAGAAAATGACTCTATCTCTAACCTGGTTGATATATCGCAACTAATTCAAATTAG TAAAAATCGAAAATGTTATCGCATTTTGAAATTGTCTTTTGTGAAGATTGTTTCTTTCAT TTATTTGTTTAATGCATTTTATAATAAAGTCAAACTATTTTAAAATCTTTGTTTAAAATA ATAGCTTACTTACGTGGCAAGTTGAGGAATTTCAATAAGAAGAGGCACCGCGCGCATGTC TTTTACAATTCCTATGGGATCCTC |
| GenBank Accession | AL757711 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr2:16115632 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | T19C21 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
