SimpleSearch - Line and FST details


Line specific information

 
Line ID 161E06
Vector Used pAC161
Line Availability available as T3 set from NASC (N415414)
Segregation Analysis 100:99:76
Confirmed for Hit At2g19800
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At2g19800

Sequence (A. th genome BLAST matches underlined)
>45-K013272-022-161-E06-8409
TGATCCATTGTAGATTTCCCTGACATGAAGCCTTTACATGTAGACCTATGACTTTGTAAG
CAAAACAAACATACTTTNCACTATGCCTATAGAATCCTCCCTATAGTGAGNGGNANANNA
ANNGGCGNNGCCACAACNNGTTTTCTATTCATAGGGCGGACGGGAGCCCGTTATATAGAC
CTCGCAGGTTTGCGTTCGAATACGAAGAGATAGGTCTACGCGCAAATGGTTTGCTGTCCG
AAAATCTACATGGCATTACTGGTTTTGTAGGGGTAATTATGAGAGAAAAGCAACGAGGTT
TTTCATTTTTCCTTATTCAAAGGCGGCATCGCCCGTTACTAAATTCCACCCTCTCGCGCC
TGTACGGGATACTCCTGTCTCGTGACAACCACCATACACGAAGCACATGTTCCTTCGACA
CACACATATACCACCGGTCTTTTCTTCGCCTCACCCGTCCGTTGCGCTTCGTTTCCGCGC
GTATCTATACCCCCCGCCCCCGTCCCCCCAGTCGTTACCTCACCGAATATTCCCCCTTAC
CCTCGCACTCTCGCGCACCGCCGCGGCCATTCCCCCCTACTACTGTGTGATCGTTGCGTA
CGCGTACGCTTTCCCGGCCGTCGTATCCGATGCGCGTCGTNTGCACCGCACGCGTACGCC
GTCTGCCGGTAGGTNATAAAAGACCGCCCGGGCCATGAGCGGCCCGTATTTGCGATATTT
CCTCGGTCGGCCAGTCGATCGGGTACGCGCTTAGGTAGTATATAAGCTGCCCCTATGTTT
TATCCGCCGACGTGAATGTACTAAGCCTGAATGGTCTCGCCGCTGAGGGGCATTCACTCG
CCTCGCTCGGTAGTGTCCGTCGCCGCCTGTTGCGTTCTTGTAGCCGGCCGTCTGTTTTGA
TGTGGTTCACAGCCACGCCCTCGAAAGACCCCGCACCCCGTGCCCCACCCCCACGCCGCC
CGGCTAAATAACCGTGACGCCTGGTGTCCGCTATGTGCGTGCTCCCGCGACCCGCCTTTC
CTCTCCGTGGTACAACACCATTACATTTCACTTCCTTAAGTCAC
GenBank Accession AL758714 [GenBank]
Graphic View Graphic view of gene At2g19800
Predicted Position of Insertion Chr2:8532881 - go to primer design
BLAST e Value 3e-11
Hit Clone Code (BAC ID) F6F22
Hit Gene Code At2g19800 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation myo-inositol oxygenase 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details