SimpleSearch - Line and FST details


Line specific information

 
Line ID 195A05
Vector Used pAC161
Line Availability available as T3 set from NASC (N418629)
Segregation Analysis 50:26:15
Confirmed for Hit At4g17680
Parent of DUPLO pair 11705
Parent of pair(s) none

Gene hit At4g17680

Sequence (A. th genome BLAST matches underlined)
>33-K014696-022-195-A05-8409
TTGATCCATGTAGATTTCCCGGACATGAGCCATTACAATTGATATATCCTCGTTACATGC
TCATCTCCACAAGCATAGCTAACCGCGCTATGGAATCCTCCCTATAGTGAGAACTTAAAG
CAGGCTGACGCTTAATAGAGAGGTCGAAGAATGAACCGAGACGTCGTGACATTTCGCTTT
CTGGCCGTAGTTGGAGCCTGTTTACTGGACTTTGAGAACCCCCAATANCAGTGAGGGGAG
GGGGGCCCCAACTACGCTGTATAGATCCTCTTTATTTCACCGGAGTACAGGCATGACAAT
ACCGAGGCACAGATCGCTTTTGCCGNTGGGCAGAAACTAGCGATCCTGCTTTAAGTAGNA
GCAAGACGGCTGTTTAAAGCGTAGGGCGTGGATGCAGCGATGGGAGACTTTACATAGAAT
TGAGGGGGACGATCGGCGCGCGGAGGAGATGGCAGGCGCGTGGGGCGAGATAGGGGACAT
CCGAGACGGGGGAAAGGAAGGGAGGAGAGGAAAGGGGAAGAACAGCG
GenBank Accession FR805498 [GenBank]
Graphic View Graphic view of gene At4g17680
Predicted Position of Insertion Chr4:9843208 - go to primer design
BLAST e Value 3e-05
Hit Clone Code (BAC ID) FCAALL
Hit Gene Code At4g17680 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation SBP (S-ribonuclease binding protein) family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details