SimpleSearch - Line and FST details


Line specific information

 
Line ID 217H04
Vector Used pAC161
Line Availability available as T3 set from NASC (N420824)
Segregation Analysis 50:43:31
Confirmed for Hit At5g16440
Parent of DUPLO pair 1895
Parent of pair(s) none

Gene hit At5g16440

Sequence (A. th genome BLAST matches underlined)
>32-K014142-022-217-H04-8409
TTGATCCATGTAGATTTCCCGGACATGAAGCACTTTACAATTGGTAATTGCTCATTGGTG
TTTTTATTCAACTCCAGTATGAGTTGCTTCTCCAGGTATTTTCTTATGATCACCTTGATT
GTGAAGACGACTCTATGGGATCCTCCCTATAGTGAGACTATGACACCCTCCATGTGTGAA
CGCGCTGGGATCCTCCATATACCGCGCCGAACCCAGTGAAGCCATGGGCCTCTACAGACG
ACAGCGTAGACGAATATCAGGCATAGGACAGGACATTTGGGGTCGAGCGGGTCGAGGTAA
AGCTGAATATCCGAGTTGCTA
GenBank Accession AL767265 [GenBank]
Graphic View Graphic view of gene At5g16440
Predicted Position of Insertion Chr5:5372563 - go to primer design
BLAST e Value 3e-32
Hit Clone Code (BAC ID) MQK4
Hit Gene Code At5g16440 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation isopentenyl diphosphate isomerase 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details