SimpleSearch - Line and FST details
Line specific information
Line ID | 235E02 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N422514) |
Segregation Analysis | 50:17:6 |
Confirmed for Hit | At4g16990 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At4g16990
Sequence (A. th genome BLAST matches underlined) | >13-K014338-022-235-E02-8409 NTTTGATCCATGTAGCATTTCCCGGACATGACAGCCTTTACAATTGAATATTTCCTGATC ATCCTATAGAGGAAGAAGAGACAGTGTATTCTTGTACTCCTCCCGTGATTATGAAGCACC ACCCAAATAATATAGGATTATTGTTGATTTTGCCATTTTGTGACTTACATCTTTTAGATT TGCCACCTTCAAATATTTTAGATTTTGCGTTTTCTGCAACTTTAAAAAATGAAACACTTG AGATTTTTTTTTGTAAAATACATACTTAATAACAAACACTATACCCTAAAAAAAATATGG AACTAAATAAACCCAAACGTAATGTGTTAAATTGTATTTTTTAGATATAAAAAATGGCAA AATCTATAAATACCACTAAAAAAATCCTTGTCGGGTAATTGGTTCAAAAAAAAATTCAAT CCATGTCAAGGAGATTAGCTTTAACTTGCTTCTTTTGAATTATACTACTTACAGAAAATC TACGTAAAGAAATTCAAATCTCTTAAGAAATCCGTATAATTGTTTTTTTTTTTTAAATAA CCATTTTGGGGATCCCCC |
GenBank Accession | AL938494 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr4:9559957 - go to primer design |
BLAST e Value | 3e-91 |
Hit Clone Code (BAC ID) | FCAALL |
Hit Gene Code | At4g16990 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | disease resistance protein (TIR-NBS class) |
Insertion Classification | TS2TE (5') |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |