SimpleSearch - Line and FST details


Line specific information

 
Line ID 235E02
Vector Used pAC161
Line Availability available as T3 set from NASC (N422514)
Segregation Analysis 50:17:6
Confirmed for Hit At4g16990
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At4g16990

Sequence (A. th genome BLAST matches underlined)
>13-K014338-022-235-E02-8409
NTTTGATCCATGTAGCATTTCCCGGACATGACAGCCTTTACAATTGAATATTTCCTGATC
ATCCTATAGAGGAAGAAGAGACAGTGTATTCTTGTACTCCTCCCGTGATTATGAAGCACC
ACCCAAATAATATAGGATTATTGTTGATTTTGCCATTTTGTGACTTACATCTTTTAGATT
TGCCACCTTCAAATATTTTAGATTTTGCGTTTTCTGCAACTTTAAAAAATGAAACACTTG
AGATTTTTTTTTGTAAAATACATACTTAATAACAAACACTATACCCTAAAAAAAATATGG
AACTAAATAAACCCAAACGTAATGTGTTAAATTGTATTTTTTAGATATAAAAAATGGCAA
AATCTATAAATACCACTAAAAAAATCCTTGTCGGGTAATTGGTTCAAAAAAAAATTCAAT
CCATGTCAAGGAGATTAGCTTTAACTTGCTTCTTTTGAATTATACTACTTACAGAAAATC
TACGTAAAGAAATTCAAATCTCTTAAGAAATCCGTATAATTGTTTTTTTTTTTTAAATAA
CCATTTTGGGGATCCCCC
GenBank Accession AL938494 [GenBank]
Graphic View Graphic view of gene At4g16990
Predicted Position of Insertion Chr4:9559957 - go to primer design
BLAST e Value 3e-91
Hit Clone Code (BAC ID) FCAALL
Hit Gene Code At4g16990 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation disease resistance protein (TIR-NBS class)
Insertion Classification TS2TE (5')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details