SimpleSearch - Line and FST details


Line specific information

 
Line ID 260D11
Vector Used pAC161
Line Availability available as T3 set from NASC (N424911)
Segregation Analysis 50:49:43
Confirmed for Hit At1g16780
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At1g16780

 
Sequence (A. th genome BLAST matches underlined) 
>84-K014949-022-260-D11-8409
TTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGGACGA
CTTACTTGCTATGGGATACTTAACTATAAAGCGACAAAGTCTGACTATATCTTGATCAGC
TAGTTCACACTTTTTCACTCGGGATTGACTCCGAGAGAAACACCTTCCATATATAGTTTT
CAGCATAAGATAAGATTCTGAGATAAAACTGACAAGATTTAAGCCCCGGAAAATTTCTCT
GTGTTAATCGGACACCATGAAATTCTACTGGAAGATTTAGCTAGACTGAGCGACCTCCAG
CGGTGTGTAGATAAACCAATCGTATCCTGATACTGCCTGTCATGATGTAGACGAAAACTA
AAAGCGTAACTCGACTGAGAATGAGCGAAACTGATGGCAAAATAACAGATACGAATAATA
TTTGTTTCCGAAATGCGAGTAAGAAAACCCCTAAATCGGCGAAACAGTGAAGACAAATTA
CAGTTTCAGAGAATGGTCAGAAGAAAACCGCCATCAACTCGAAGCTTGTCGTCCTATGGG
ATCCTCC
GenBank Accession AL941745 [GenBank]
Graphic View Graphic view of gene At1g16780
Predicted Position of Insertion Chr1:5743691 - go to primer design
BLAST e Value 1e-158
Hit Clone Code (BAC ID) F17F16
Hit Gene Code At1g16780 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Inorganic H pyrophosphatase family protein
Insertion Classification TS2TE (5')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL941744 [GenBank]


Last Updated on 10.06.2021 13:37