SimpleSearch - Line and FST details
Line specific information
Line ID | 260E03 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N424915) |
Segregation Analysis | 50:24:16 |
Confirmed for Hit | At5g49970 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At5g49970
Sequence (A. th genome BLAST matches underlined) | >21-K014924-022-260-E03-8409 NTGATCCATGTAGAATTTCCCGGACCATGAAGCCTCTACATAACATCAAAGTCCTTTGAC AAGTCATCCGGCAGATCCTCAACGGAAACAAAAGGGACTGAGAGTGAATCCAACTACAAA AACAGGCAAATTCAGCAGGCAGTAAAGAAACGGAGAAAGCTAACAAAGATCCCCCATAAA TTAAGCACTGGTTACACAAACCTGAGTGACCAGTCCAGTATAAAGTGGCTTGGCTGTACG TTTGGGATAACAAATAAACGGTTTATATCCAAAGTGGTGCAAATGCCTCGCCGCCACCAA ACCATCACCACCATTGTTCCCAGGACCACAGATAGCTATGGGATCCT |
GenBank Accession | AL941748 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr5:20330235 - go to primer design |
BLAST e Value | 3e-168 |
Hit Clone Code (BAC ID) | K9P8 |
Hit Gene Code | At5g49970 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | pyridoxin (pyrodoxamine) 5'-phosphate oxidase |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |