SimpleSearch - Line and FST details
Line specific information
Line ID | 291D01 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N427877) |
Segregation Analysis | 100:90:73 |
Confirmed for Hit | At5g49330 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At5g49330
Sequence (A. th genome BLAST matches underlined) | >49-K119111-0022-291-D01C-35St AGACCCTTCCTCTATATAGGAAGTTCATTTCATTTGGAGAGGACAGGGTACCCNGGGTTT CAAAGACTCTCCTTCAAAATTACCATTTTGCCCTCCCTCACTGAAATCACTCTCTAGCTC CTTAGGTTGTGAGAAACATTGTGAGGCCGTCACCATTTGCTTGTGTTTCTTCATGGATGA CCTACTAGTCCTTCCCTTCTTCTTCTTCTTGGTCTTGTTATTGTTCTTGGCTCCAGAAGA CGATGAACAAGATTTCTTCAAGACTACATCGTTGACGAGTAGATTGTGTCCATCTCCGGA AACGGCAGTGAAGGCATAGATTTTGCGGCTGAGATGTGAGTTCCAATAGTTTTTAATTTC GTTGTCTGTTCTTCCTGGTAGATGTGTTGCAATAAGTGACCATCTATAAGAAAATAGTCA CATGCACACACGTGAGACAACATAAATTTAGACAAATCAATTAATTATGTGTACACACTC TTTACAAGTTGGCTTCTCATTAATTCAATACCAATACTACAACAAAATGTATGACGTCAG AAAAATTGCATGGTTTAGTTATGTGTAACTAATTTTTCTTTAAAAATGGTTGGACTGTTC CTCATTTTTTTATAAGAGTTAGCACTGAATATATTCAGATTTCGTAGAAACACCTTAATT CTAGAAATGAGTTGATTTATTGGTAAATAAGTTTCTAAATTTTATTGCAACTAANAATAC CGAAACTCAATGAAGAAGATTAGAAGTTTAGGCACAGTAAAATTCAAATTTGGAGCTNNT AACATGCATTAACTCTATAGACTCA |
GenBank Accession | LN713412 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr5:19999570 - go to primer design |
BLAST e Value | 0.0 |
Hit Clone Code (BAC ID) | K21P3 |
Hit Gene Code | At5g49330 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | myb domain protein 111 |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |