SimpleSearch - Line and FST details


Line specific information

 
Line ID 298B03
Vector Used pAC161
Line Availability available as T3 set from NASC (N428527)
Segregation Analysis 50:50:41
Confirmed for Hit At5g25265
Parent of DUPLO pair none
Parent of pair(s) 41362, 83845

Gene hit At5g25265

Sequence (A. th genome BLAST matches underlined)
>18-K015514-022-298-B03-8409
NTTTTGATCCATGTAGCATTTCCCGGACATGAACCGAAAAAGTATGAGAAGGTGTTGAGG
AAGTATTATCCTGAAGTGAGAGGACCGGTTACTAATATCGATCCGATAGGAAACTCTCCT
GTCATTGTTGGAAAGGTTTGTTCTTGTTGCATATAATTAGAAAACAATTTGGGATCAGGT
CCCTTTAAAGATTGTAAATGTTATGTTTTTTTAGGATGCTTTGAAGAAGATTGCTCCAAC
TTGGATGAATGTTTCTTTGGCTATGAAGAAGGATCCTGAAGCAGACAAGGCTTTTGGATG
GGTTCTTGAAATGTAAAAGTCTTCTGATTAGAAGTAGTTTTGATTGTTGATTGAGTAGAA
TTGATGACAATTGTTTGTTATCTTTTGTGGAAGTATAGGTATGCTTATGCTGTCTCATCT
GCATTGCATGGTGTTAGCAATATTCTACACAAAGACTTCATGATTCAGGTAATCTTATAC
ACACATTTTGGCATTCTTTGAAATTTGTATATTGTTTTTATGCGTGTGGCGGTTATGAAT
GGAGGCAAAAGTGTATCATCCATGCCTATTTTCATGAGCTATGGGATCCTC
GenBank Accession AL946654 [GenBank]
Graphic View Graphic view of gene At5g25265
Predicted Position of Insertion Chr5:8756112 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F21J6
Hit Gene Code At5g25265 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Hyp O-arabinosyltransferase-like protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details