SimpleSearch - Line and FST details
Line specific information
Line ID | 299B05 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N428625) |
Segregation Analysis | 50:20:15 |
Confirmed for Hit | At1g63840 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At1g63840
Sequence (A. th genome BLAST matches underlined) | >34-K015556-022-299-B05-8409 NTTTTGATCCATGTAGAATTTCCCGGACCATGAAGCCTTTACAATTGAATATAGATTAAG CCATGTAGATTCTCTCTCTCTGTCTCTTGTCTTATCATTTATCTCTCTAACGGCGAGGCA ATGGGTTTTCCGGTGGGATATTCTGAGCTACTTCTCCCAAAAATCTTTTTCTACTTGTTA TCTTTCTTAGGTTTGATACGTAAACTCATCTCCACAATGTTCAAGATCATTGGTCTACCA GATTTCTTAGAACCTGAACCGGTTTCAACCTCATGGCCCGACCCACCACCCACGTTGACC AAACCTGACTCAGCAGCAATACTATGGGATCCTCCCATGTNGGNNGAGNCTCGACCCTCA CTCATGCGATCTATGAACACGTCATAGAAAACATTCTGTATGAGGACAATCCAGGGTCAG GTGACTCCGTTTGTGCACATACTAGCAGCTCGTCAGCACTATTCCTATGGGATACTAACT TAATGGAGAAAGTGTGATGTCGCGTAAATCTCCCATGTTGCCTCCTGCTATTAGAGACCT CAGGGACTCCTCCTGATAGGTGAGAACAGAAGCCCGAACATCAGTCTCTCTTCGGACGCT GGTGAAGCCATAACCGCTAAGGAAGAACCACTCTGAATCCAACAAGTCACAGAAAA |
GenBank Accession | AL946789 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr1:23690553 - go to primer design |
BLAST e Value | 9e-119 |
Hit Clone Code (BAC ID) | T12P18 |
Hit Gene Code | At1g63840 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | RING/U-box superfamily protein |
Insertion Classification | TS2TE (5') |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |