SimpleSearch - Line and FST details
Line specific information
| Line ID | 330G02 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N431658) |
| Segregation Analysis | 100:99:83 |
| Confirmed for Hit | At2g47460 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit MSJ1
| Sequence (A. th genome BLAST matches underlined) | >15-K016036-022-330-G02-8409 TGATCTGTAATTTCCCGGACATGAAGCCATTTACATTGAATATATCCTGCCTGCCGCTGC CGATTTGCTCTCAGAGTAGCTTGCTTGTTGGTTTGTACTCAAAACGGATCTCGCGGTACG CACATTATGTATGCATTGTGACCTGCACCATGTGCCCCTCCTAAGAGATTGGAATTCGAC CTCATATACCCACATCTATATTAATCCTTACACACTCATTAATTGTGATCGACTTGTTTT TTGTATGAATATATATCGCGATTGTTATGCTTCGGCTATGAGATATATCCATATAACGAG GGAGTTGGCTATGGGATCCTCCCCTTATAGTGAGANNNANAAACNANTGCATTGCATGTT TGTCTATGGGATCCTCCCTATATTGAGANGAACCACCTTCGTTTTCCACTATCTTCCCAA TAAAGTGACAGATAGCTGGGCAATGGAATCCGAGGAGGTTTCCGAATATTACCCTTTGGT GAAAACCCTCCCTTAGCCTTTGGTCTTCTGAAAATGGATCTCTGAAATTTTTGCAGTAGA CAACGGAGTCGTGCTCCACCATGTTAACGACCAATTTCTTCTCGCCCTTGACTCTTAAGA AACTCT |
| GenBank Accession | FR808043 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr5:25701050 - go to primer design |
| BLAST e Value | 4e-07 |
| Hit Clone Code (BAC ID) | MSJ1 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
Gene hit At2g47460
| Sequence (A. th genome BLAST matches underlined) | >15-K016045-022-330-G02-8409 TGATCTGAAATTTCCCGGACTGAAGCCTTTACATTGAATATATCCTGCACACCTATATCG TCGATGCCGGACAGGTTAGTGTTACCAAGAGTAGACTCCGAACGTATGCATGGGGATGAT CGCGTGTAGATATTTATAACTATGGGACTCTCATCTTAGATGCGAAACTTTATGATATGA TACGACGTGGAATAGATTCAAACTGTGAATGCACAAAAAAGATTACATAACGGATCAATC AATATCATCATGACAGAAGCCAAGCGACCAAAGCGCTTTCGTCGTCATGATCTAACGGTT CTCCAAAGTTCTCACAATTACTATTCCCGATCGTGGCCTCATCATCACCGTCTAAAAGCC ACGAGACCATTGAGTCGGGATTCTCTTTCTCATGCCAAAGATTATTATCACTACCTTCTT GCCAAACACAATCCCAATCGATAAACTCATCCGTCGACGCATCGTTAACTTGGTGGTCGT AGTTGAGAAACGACTCCACCGATGGACAAGACTGAAGAAGACAGTCGAGATTCCCTTGGT TCCAAGTATCCGAGAACCCTCTGGCTCCTTCAGAGTCTCTTATNGTATGCAACTCCCCAT CACCACCGCACGTTGTGTTTGTGTACAAGTGGCCAGGATCTGACTCGTCCAACAAAAGAT CGATGATATCATCATCAAACGTTAAAACTCCATTATCGCCAATAATGCTCATGAGATTTT TTGTACAATCATCTCCATAGTAGTCACATGGTCGTCCTA |
| GenBank Accession | BX285311 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr2:19479431 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | T30B22 |
| Hit Gene Code | At2g47460 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | myb domain protein 12 |
| Insertion Classification | TS2TE (3') |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
